Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cebus_20capucinus_20imitator_20[refseq_20GCF_5F001604975.1_202016- 04-04] 7,156 sequences; 2,717,703,182 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq585 129 5e-25 seq170 127 2e-24 seq231 122 8e-23 seq573 120 3e-22 seq181 114 1e-20 seq4 114 1e-20 seq3 111 1e-19 seq290 109 5e-19 seq142 102 7e-17 seq63 102 7e-17 seq53 102 7e-17 seq72 96.9 3e-15 seq69 96.9 3e-15 seq503 95.1 1e-14 seq19 95.1 1e-14 seq966 93.3 4e-14 seq34 87.8 2e-12 seq1 86.0 6e-12 seq407 82.4 7e-11 >seq585 Length=1056956 Score = 129 bits (142), Expect = 5e-25 Identities = 145/194 (75%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 ||| || || |||||||| || | |||||| ||| | || ||||||||||| || ||||| Sbjct 519144 CTCTTTCTGGATGTTGTAGTCAGACAAGGTGCGCCCATCTTCCAGCTGCTTTCCAGCAAA 519203 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 ||||||| ||||||||| | ||| | || ||||||||| ||||||| ||| | | Sbjct 519204 GATCAACCTCTGCTGGTCAGGAGGGATGCCTTCCTTGTCCTAGATCTTTGCCTTGACGTT 519263 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | ||||| || | || ||||| | ||||| || ||||| |||| || ||||| Sbjct 519264 CTTAATGGTGTCACTGGGCTCGACCTCAAGGGTGATGGTCTTACCAGTCAGGGTCTTCAC 519323 Query 35725 AAATATCTGCATTC 35738 ||| |||||||||| Sbjct 519324 AAAGATCTGCATTC 519337 >seq170 Length=4466143 Score = 127 bits (140), Expect = 2e-24 Identities = 144/193 (75%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 ||| ||||| |||||||| || | || ||| ||| | || ||||||||||| || ||||| Sbjct 3883264 CTCTTTTTGGATGTTGTAGTCAGACAGGGTGCGCCCATCTTCCAGCTGCTTTCCGGCAAA 3883323 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 ||||||| ||||||||| | ||| | || ||||||||| ||||||| ||| | | Sbjct 3883324 GATCAACCTCTGCTGGTCAGGAGGGATGCCTTCCTTGTCCTGGATCTTTGCCTTGACGTT 3883383 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | ||||| || | |||||||| | ||||| || || || |||| || ||||| Sbjct 3883384 CTCAATGGTGTCACTGGGCTCCACCTCGAGGGTGATGGTCTTGCCGGTCAGTGTCTTCAC 3883443 Query 35725 AAATATCTGCATT 35737 || ||||||||| Sbjct 3883444 GAAGATCTGCATT 3883456 >seq231 Length=3498576 Score = 122 bits (134), Expect = 8e-23 Identities = 144/195 (74%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 ||| ||||| |||||||| || | || ||| || | || ||||||||||| || ||||| Sbjct 69591 CTCTTTTTGGATGTTGTAGTCAGACAGGGTGTGCCCATCTTCCAGCTGCTTTCCAGCAAA 69650 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 ||||||| | ||||||| | ||| | || ||||||||| ||||||| ||| | | Sbjct 69651 GATCAACCTCCGCTGGTCAGGAGGGATGCCTTCCTTGTCCTGGATCTTTGCCTTGACGTT 69710 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | ||||| || | || ||||| | ||||| || ||||| |||| || ||||| Sbjct 69711 CTCAATGGTGTCACTGGGCTCGACCTCAAGGGTGATGGTCTTACCAGTCAGGGTCTTCAC 69770 Query 35725 AAATATCTGCATTCT 35739 ||||||||||| || Sbjct 69771 TAATATCTGCATCCT 69785 >seq573 Length=1150292 Score = 120 bits (132), Expect = 3e-22 Identities = 165/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | |||||||| | ||| | ||| |||||| ||||||||||| || | | Sbjct 200470 CCACCACGAAGTCTCAACACAAGATGAAGAGTAGACTCCTTCTGAATGTTGTAGTCAGAC 200529 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 || || || | || ||||| ||||| || ||||| |||| | ||||| || | |||| Sbjct 200530 AAAGTACGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGA 200589 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689 | | ||||| ||| |||||| ||| | | || | | ||| || | ||| ||| Sbjct 200590 ATTCCTTCCTTATCCTGGATCTTGGCCTTTACATTTTCTATCGTATCCGAGGGTTCAACC 200649 Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATTCTG 35740 || | ||||| || || ||||| | |||||||| || ||||||||| || Sbjct 200650 TCGAGGGTGATGGTCTTCCCCGTAAGGGTTTTCACGAAAATCTGCATTTTG 200700 >seq181 Length=4179193 Score = 114 bits (126), Expect = 1e-20 Identities = 164/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | |||||||| | ||| | ||| |||||| ||||||||||| || | | Sbjct 2580467 CCACCACGAAGTCTCAACACAAGATGAAGAGTAGACTCCTTCTGAATGTTGTAGTCAGAC 2580526 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 || || || | || ||||| ||||| || ||||| |||| | ||||| || | | || Sbjct 2580527 AAAGTACGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGACGA 2580586 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689 | | ||||| ||| |||||| ||| | | || | | ||| || | ||| ||| Sbjct 2580587 ATTCCTTCCTTATCCTGGATCTTGGCCTTTACATTTTCTATCGTATCCGAGGGTTCAACC 2580646 Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATTCTG 35740 || | ||||| || || ||||| | |||||||| || ||||||||| || Sbjct 2580647 TCGAGGGTGATGGTCTTCCCCGTAAGGGTTTTCACGAAAATCTGCATTTTG 2580697 >seq4 Length=15321207 Score = 114 bits (126), Expect = 1e-20 Identities = 164/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| || |||||||| | ||| | ||| |||||| ||||||||||| || | | Sbjct 5243222 CCACCACGAAATCTCAACACAAGATGAAGAGTAGACTCCTTCTGAATGTTGTAGTCAGAC 5243163 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 || || || | || ||||| ||||| || ||||| |||| | ||||| || | |||| Sbjct 5243162 AAAGTACGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGA 5243103 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689 | | ||||| ||| ||| || ||| | | || | | ||| || | ||| ||| Sbjct 5243102 ATTCCTTCCTTATCCTGGATTTTGGCCTTTACATTTTCTATCGTTTCCGAGGGTTCAACC 5243043 Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATTCTG 35740 || | || || || || ||||| | |||||||| || ||||||||| || Sbjct 5243042 TCGAGGGTTATGGTCTTCCCCGTAAGGGTTTTCACGAAAATCTGCATTTTG 5242992 >seq3 Length=16812482 Score = 111 bits (122), Expect = 1e-19 Identities = 163/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | |||| ||| | ||| | ||| |||||| ||||||||||| || | | Sbjct 14706844 CCACCACGAAGTCTCAGCACAAGATGAAGAGTAGACTCCTTCTGAATGTTGTAGTCAGAC 14706903 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 || || || | || ||||| ||||| || ||||| |||| | ||||| || | |||| Sbjct 14706904 AAAGTACGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGA 14706963 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689 | | ||||| ||| |||||| ||| | | || | | | | || | ||| ||| Sbjct 14706964 ATTCCTTCCTTATCCTGGATCTTGGCCTTTACATTTTCTATCATATCTGAGGGTTCAACC 14707023 Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATTCTG 35740 || | ||||| || || ||||| | |||||||| || ||||||||| || Sbjct 14707024 TCGAGGGTGATGGTCTTCCCCGTAAGGGTTTTCACGAAAATCTGCATTTTG 14707074 >seq290 Length=2922102 Score = 109 bits (120), Expect = 5e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | |||||||| | ||| | || |||||||||||||||||| || | | Sbjct 1757541 CCACCACGAAGTCTCAACACAAGATGAAGAATAGACTCCTTTTGAATGTTGTAGTCAGAC 1757600 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 || || | | || ||||| ||||| || ||||| |||| || ||||| || ||||| Sbjct 1757601 AAAGTACATCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGCCTTTGCTGATCACAAGGA 1757660 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689 | | || || ||| |||||| ||| | | || | | ||| || | ||| || Sbjct 1757661 ATTCCTTCTTTATCCTGGATCTTGGACTTTACATTTTCTATCGTATCCGAAGGTTCAGCC 1757720 Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATT 35737 || | ||||| || || ||| | | ||||||||||| ||||||||| Sbjct 1757721 TCGAGGGTGATGGTCTTCCCCATAAGGGTTTTCACAAAAATCTGCATT 1757768 >seq142 Length=5139840 Score = 102 bits (112), Expect = 7e-17 Identities = 161/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | |||||||| | ||| | ||| |||| ||||||||||||| || | Sbjct 3725168 CCACCACGAAGTCTCAACACAAGATGAAGAGTAGACTCCCTTTGAATGTTGTAGTCAAAC 3725227 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 || || || ||| ||||| ||||| || ||||| |||| | ||||| | | |||| Sbjct 3725228 AAAGTACGTCTGTCTTCCAGTTGCTTGCCAGCAAAGATCAGTCCTTGCTGACCAGGAGGA 3725287 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689 | | ||||| ||| |||||| ||| | | || | | ||| || | ||| ||| Sbjct 3725288 ATTCCTTCCTTATCCTGGATCTTGGCCTTTACATTTTCTATCGTATCCGAGGGTTCAACC 3725347 Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATTCTG 35740 || | |||| || || || || | |||||||| || ||||||||| || Sbjct 3725348 TCGAGGTTGATGGTCTTCCCTGTAAGGGTTTTCACGAAAATCTGCATTTTG 3725398 >seq63 Length=8132274 Score = 102 bits (112), Expect = 7e-17 Identities = 161/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||| | | |||||||| | ||| | ||| |||||| ||||||||||| || | | Sbjct 6710334 CCACCAAGAAGTCTCAACACAAGATGAAGAGTAGACTCCTTCTGAATGTTGTAGTCAGAC 6710393 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 || || || | | ||||| ||||| || ||||| |||| | ||||| || | |||| Sbjct 6710394 AAAGTACGTCCACCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGA 6710453 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689 | | ||||| ||| || ||| ||| | | || | | ||| || | ||| ||| Sbjct 6710454 ATTCCTTCCTTATCCTGGACCTTGGTCTTTACATTTTCTATCGTATCCGAGGGTTCAACC 6710513 Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATTCTG 35740 || | ||||| || || ||| | | |||||||| || ||||||||| || Sbjct 6710514 TCGAGGGTGATGGTCTTCCCCATAAGGGTTTTCACGAAAATCTGCATTTTG 6710564 >seq53 Length=8749341 Score = 102 bits (112), Expect = 7e-17 Identities = 161/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | |||||||| | ||| | ||| |||||| |||||| |||| || | | Sbjct 1284764 CCACCACGAAGACTCAACACAAGATGAAGAGTAGACTCCTTCTGAATGCTGTAGTCAGAC 1284823 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 || || || | || ||||| ||| | || ||||| |||| | ||||| || | | || Sbjct 1284824 AAAGTACGTCCATCTTCCAGTTGCCTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAAGA 1284883 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689 | | ||||| ||| |||||| ||| | | | | | ||| || | ||| ||| Sbjct 1284884 ATTCCTTCCTTATCCTGGATCTTGGCCTTTACATCTTCTATCGTTTCCAAGGTTTCAACC 1284943 Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATTCTG 35740 || | ||||| || || || || | ||||||||||| ||||||||| || Sbjct 1284944 TCGAGGGTGATGGTCTTCCCTGTAAGGGTTTTCACAAAAATCTGCATTTTG 1284994 >seq72 Length=7750101 Score = 96.9 bits (106), Expect = 3e-15 Identities = 154/220 (70%), Gaps = 1/220 (0%) Strand=Plus/Plus Query 35522 CTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCG 35581 |||||||| | ||| | ||| |||||| ||||||||||| || | || || || | Sbjct 2355988 CTCAACACAAGATGAAGAGTAGACTCCTTCTGAATGTTGTAGTCAGATAAAGTGCGTCCA 2356047 Query 35582 TCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTG 35641 || ||||| ||| || ||||| |||| | ||||| || | ||||| | ||||| Sbjct 2356048 TCTTCCAGTGTCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTA 2356107 Query 35642 TCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATC 35701 ||| ||| || ||| | | || | | ||| || | ||| ||||| | || || Sbjct 2356108 TCCTGGATTTTGGCCTTTACATTTTCTATCGTATCCGAGGGTTCAACCTCGAGGGTAATG 2356167 Query 35702 GT-TTTACCCGTCAAAGTTTTCACAAATATCTGCATTCTG 35740 || ||| ||||| | |||||||||||| ||||||||| || Sbjct 2356168 GTCTTTCCCCGTAAGAGTTTTCACAAAAATCTGCATTTTG 2356207 >seq69 Length=11786368 Score = 96.9 bits (106), Expect = 3e-15 Identities = 160/231 (69%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | |||||||| | ||| | ||| |||||| ||||||||||| || | | Sbjct 9297237 CCACCACGAAGTCTCAACACAAGATGAAGAGTAGACTCCTTCTGAATGTTGTAGTCAGAC 9297178 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 || || | | || ||||| ||||| || ||||| |||| | ||||| || | |||| Sbjct 9297177 AAAGTACCTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGA 9297118 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689 | || ||||| || |||||| ||| | | || | || || | ||| ||| Sbjct 9297117 ATGCCTTCCTTATCTTGGATCTTGGCCTTTACATTTTCTGTAGTATCCAAGGGTTCAACC 9297058 Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATTCTG 35740 || | |||| || || || || | |||||||| || ||||||||| || Sbjct 9297057 TCGAGGTTGATGGTCTTCCCTGTAAGGGTTTTCACGAAAATCTGCATTTTG 9297007 >seq503 Length=1449082 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/196 (71%), Gaps = 2/196 (1%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 ||| || || ||||||||||| | | || | | || ||||||||||| || ||||| Sbjct 1047227 CTCTTTCTGGATGTTGTAATCAGAGAGAGTGCAGCCATCTTCCAGCTGCTTGCCTGCAAA 1047168 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | || ||||||||| | || | || ||||| ||| |||||| ||||| | | Sbjct 1047167 GATGAGCCTCTGCTGGTCGG--GGGATGCCTTCCTTATCCTGGATCTTGGCCTTCACATT 1047110 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | | ||||| || | |||||||||| ||||| || || || |||| || ||||| Sbjct 1047109 TTCGATGGTGTCACTAGGCTCCACCTCCAAGGTGATGGTCTTGCCGGTCAGGGTCTTCAC 1047050 Query 35725 AAATATCTGCATTCTG 35740 || || | |||| || Sbjct 1047049 GAAGATATACATTTTG 1047034 >seq19 Length=20362211 Score = 95.1 bits (104), Expect = 1e-14 Identities = 160/232 (69%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 35509 TCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGC 35568 |||||||| | |||||||| | ||| | ||| |||||||||||||||||| || | Sbjct 6160572 TCCACCACAAAGTCTCAACACAAGATGAAGAGTAAACTCCTTTTGAATGTTGTAGTCAGA 6160513 Query 35569 CAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGG 35628 ||| || || |||| ||||| ||||| || ||||| |||| | ||||| || | ||| Sbjct 6160512 CAAAGTACGTCCGTCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGG 6160453 Query 35629 AACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCAC 35688 || | || || ||| |||||| ||| | | || | | | || | ||| | Sbjct 6160452 AATTCCTTCTTTATCCTGGATCTTGGCCTTTACATTTTCTATTATATCCGAGGTTTCAAA 6160393 Query 35689 CTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATTCTG 35740 ||| | ||||| || | | | | | ||||||| ||| ||||||||| || Sbjct 6160392 CTCAAGGGTGATGGTCTCCCTCATAAGGGTTTTCAGAAAAATCTGCATTTTG 6160341 >seq966 Length=127580 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/231 (69%), Gaps = 5/231 (2%) Strand=Plus/Minus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | |||||||| | ||| | || ||||||| |||||||| | || | | Sbjct 10669 CCACCACGAAGTCTCAACACAAGATGAAGAGTGGACTCCTTTAGAATGTTGCAGTCAGAC 10610 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 || || || | || ||||||||||| || ||||| |||| | |||||| |||| Sbjct 10609 AAAGTACGTCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGTCTTTGCTGG-----AGGA 10555 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689 | || ||||| ||| |||||| ||| | | || | ||| || | ||| ||| Sbjct 10554 ATTCTTTCCTTATCCTGGATCTTGGCCTTTACATTTTCTGTCGTATCCAAGGGTTCAACC 10495 Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATTCTG 35740 | || ||||| || || | || |||||||| || ||||||||| || Sbjct 10494 TTCAGGGTGATGGTCTTCCTTGTTGGGGTTTTCACGAAAATCTGCATTTTG 10444 >seq34 Length=10557659 Score = 87.8 bits (96), Expect = 2e-12 Identities = 158/231 (68%), Gaps = 4/231 (2%) Strand=Plus/Minus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||| | | ||| |||| | ||| | || |||||||||||||||||| || Sbjct 1465751 CCACCATGAAGTCTCGACACAAGATGAAGACTAGACTCCTTTTGAATGTTGTAGTC---- 1465696 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 || || | | || ||||| ||||| || ||||| |||| | | ||| || | |||| Sbjct 1465695 AAAGTATGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTCCTGATCAGGAGGA 1465636 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689 | | ||||| ||| |||||| ||| | | || | | ||| || ||||| ||| Sbjct 1465635 ATTCCTTCCTTATCCTGGATCTTGGCCTTTACATTTTCTATCGTACCGGAGGATTCAACC 1465576 Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATTCTG 35740 || | ||||| | || ||| | ||||||||||| ||||||||| || Sbjct 1465575 TCGAGGGTGATGATCTTCCCCATGGGGGTTTTCACAAAAATCTGCATTTTG 1465525 >seq1 Length=21314971 Score = 86.0 bits (94), Expect = 6e-12 Identities = 142/200 (71%), Gaps = 5/200 (3%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 ||| || || |||||||| || | | || || | || |||||||| ||||| ||||| Sbjct 18631121 CTCTTTCTGGATGTTGTAGTCTGAGA--GTGCGGCCATCCTCCAGCTGTTTACCAGCAAA 18631064 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGC-TTCAGAG 35663 ||||| ||||||||||| | || | | ||||||| ||| ||| || || | | Sbjct 18631063 TATCAGACGCTGCTGGTCAGGTGGGATACCTTCCTTGT-ATTGAATTTTGGCTTTGACAT 18631005 Query 35664 TTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCA 35723 | | ||||| || | || ||||| | ||||| || || ||||| | ||| |||| Sbjct 18631004 TCTTAATGGTGTCACTGGGCTCGACCTCAAGGGTGATGGTCTTGCCCGTGACAGTCTTCA 18630945 Query 35724 CAAATATCTGCAT-TCTGTG 35742 |||| |||||||| |||||| Sbjct 18630944 CAAAGATCTGCATCTCTGTG 18630925 >seq407 Length=3256691 Score = 82.4 bits (90), Expect = 7e-11 Identities = 136/194 (70%), Gaps = 2/194 (1%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 ||| || || |||||||| || | | || || | || |||||||||| | ||||| Sbjct 904254 CTCTTTCTGGATGTTGTAGTCTGAGAGCGTGCGGCCATCCTCCAGCTGCTGGCTGGCAAA 904313 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGC-TTCAGAG 35663 ||||| ||||||||||| | || | | |||||||| | ||| ||| || || | | Sbjct 904314 TATCAGACGCTGCTGGTCAGGTGGGATACCCTCCTTGT-CTTGAATTTTGGCTTTGACAT 904372 Query 35664 TTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCA 35723 | | | ||||| | | || ||||| | ||||| || || ||||| | || |||| Sbjct 904373 TCTCAATGGTGTCATTGGGCTCGACCTCAAGGGTGATGGTCTTGCCCGTGAGGGTCTTCA 904432 Query 35724 CAAATATCTGCATT 35737 |||| ||||||||| Sbjct 904433 CAAAGATCTGCATT 904446 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450753276512480