Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cebus_20capucinus_20imitator_20[refseq_20GCF_5F001604975.1_202016- 04-04] 7,156 sequences; 2,717,703,182 total letters Query= NC_027016.1 Length=226084 Score E Sequences producing significant alignments: (Bits) Value seq34 86.0 9e-12 >seq34 Length=10557659 Score = 86.0 bits (94), Expect = 9e-12 Identities = 199/300 (66%), Gaps = 0/300 (0%) Strand=Plus/Minus Query 214601 AGGGAAGGAGATAGCTGTCGAGCTGGAGGCCTTCTACGGTGATATCGAAGCCGTCGAACT 214660 || |||||| || |||| ||| || | || |||| ||||| ||||| || | || || Sbjct 7334121 AGAGAAGGAAATGGCTGCAGAGTTGAAAGCACTCTATGGTGACATCGATGCTATGGAGCT 7334062 Query 214661 CTACGCTGATTTCCTCGCTGAAAAACCGTGTCCCGATGCCATCCTCGGTGACGGCGTCCT 214720 || ||| | || | ||||| || |||| ||||||||| | ||||| | | Sbjct 7334061 GTATCCTGCCCTTCTGGTAGAAAAGCCTCGTCCAGATGCCATCTTTGGTGAGACTATGGT 7334002 Query 214721 CGAGTCGGGGGCTCCGTTCTCCCTGAGGGGACTCGCGGCGAACGTCATCTGCTCCCCGGG 214780 || || || || |||||| ||| ||||| || || ||||| || || || | Sbjct 7334001 AGAAGTTGGAGCACCATTCTCCTTGAAAGGACTTATGGGTAATGTCATATGTTCTCCCGC 7333942 Query 214781 CTACTGGAAACGCAACACACTCGGTAGCTCCGCGAGTTTCAACATCGTGAGGAGCGCGAC 214840 ||||||||| | | ||| | ||| | | | ||||||| ||| | | | || | Sbjct 7333941 CTACTGGAAGCCAAGCACTTTTGGTGGAGAAGTGGGTTTCAAAATCATCAACACTGCCTC 7333882 Query 214841 CCTTCAGTCTCTCATCTGTAGCAACGTCAAGGGATGTCCGTTAGCCGCATTCCGAGCTCC 214900 |||||||||||||||| | ||||| || || ||||| || | ||||| | | ||| Sbjct 7333881 AATTCAGTCTCTCATCTGCAATAACGTGAAAGGCTGTCCCTTTACTTCATTCAGTGTTCC 7333822 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 723276097165440