Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cebus_20capucinus_20imitator_20[refseq_20GCF_5F001604975.1_202016-
04-04] 7,156 sequences; 2,717,703,182 total letters
Query= NC_027213.1
Length=214699
Score E
Sequences producing significant alignments: (Bits) Value
seq526 354 1e-92
seq630 304 2e-77
seq28 251 1e-61
seq494 149 9e-31
seq2 147 3e-30
seq867 123 3e-23
seq80 114 2e-20
seq57 111 2e-19
seq248 100 4e-16
>seq526
Length=1402496
Score = 354 bits (392), Expect = 1e-92
Identities = 645/937 (69%), Gaps = 14/937 (1%)
Strand=Plus/Plus
Query 39270 TTTAAAAGTCAACATCTAAAGAAAAATGATTATCTTCTTG---TGACATAACTCCCATTT 39326
|||| || ||| || | || | |||| ||| ||| | | |||||| ||||||||
Sbjct 113332 TTTAGAAATCAGCACCCAAGGTAAAAGAATTCTCTGTTGGACTTGACATCACTCCCATCC 113391
Query 39327 TTTGGTATTCACCAACGCGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTTT 39386
| || || || || || | ||||| || || ||||| || ||||||| ||| ||||| |
Sbjct 113392 TCTGATACTCGCCTACTCTCTTCTCAAAGAAGTTAGTCTTTCCTTCCAGTGAAATATTCT 113451
Query 39387 CCATGAAATCAAACGGATTAGTTGCATTAT--AtttttttttAAATCCTAATTCTGAAAT 39444
|||| || ||||| ||||| | ||| | | || |||| || | ||| ||
Sbjct 113452 CCATAAAGTCAAATGGATTCTCT--ATTCTGAAAACCTTGCTAAAACCCAGTTCCAGCAT 113509
Query 39445 CAATCTATCTGCAACAAATTCTATGTATGTTTTCATCATTTCACAATTCATTCCTATGAG 39504
||| ||||| ||||| || |||||| ||||| | |||||||| || |||||
Sbjct 113510 G--TCTGTCTGCCACAAACTCAATGTATTGCTTCATTAGAGTGCAATTCATCCCAATGAG 113567
Query 39505 TTTAACTGGTAGAGCCTCCGTTAGAAACTCTTTTTCGATGTCTACGGCCTCTGTTA-TTA 39563
| || || | ||||| || |||||||||| ||| || || || | || || |||
Sbjct 113568 CTCCACAGGCAAGGCCTCAGTAAGAAACTCTTGTTCTATCCGAACAGCAT-TGATAGTTA 113626
Query 39564 TCGATGTTACTACCTCATCACTCGGTGGATGCAATAAATGTTTAAACATTAAGCAGGCGA 39623
| | ||||| ||| || ||| || | || ||||| ||||| | ||| || |
Sbjct 113627 TTTCTCTTACTCTCTCCTCTGATGGTTTGTGTACTAGGTGTTTGAACATCAGGCAAGCAA 113686
Query 39624 AGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAGGCA 39683
| | | |||| ||||||||||| |||| | || | |||||||||||| |||||||
Sbjct 113687 AATGTGAGTGTAAACCCTCATCTCTGCTAAAAAGGTCATGAGAAAATGTGAGGCCAGGCA 113746
Query 39684 TTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATGCCTT 39743
| || || | || |||||||| ||||||| |||||||| ||||||||| |||||||||
Sbjct 113747 TCAGTCCTCATTTCTTGAGCCAGAATATGGATGCAAAAGAACCAGAAAAGTAGATGCCTT 113806
Query 39744 CTACTGCTGCAAATGCAACAAGTCTCTCTCCGTAACTTGTATCATTAT---GTATCCACT 39800
| ||||| ||||| || |||| | || || || | | || || | |||||
Sbjct 113807 CCACTGCAGCAAAGGCTACAACGCGTTCACCATAGGTAGCCTCTTTGTCCCCAATCCAGC 113866
Query 39801 TCTGTGCCCAATCAGCTTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGAT 39860
| |||||||| || ||||| || ||||||||||| ||||| || ||||| ||||||
Sbjct 113867 GCAAGGCCCAATCTGCCTTCTTGTTGACACAAGGCATCGTTTCAATGGCATTGAAGAGAA 113926
Query 39861 AATGTTTTTCATCACTATCTTTAACATATGTATCTATTAACAGACTATACATTTCTGAAT 39920
| | |||||| |||||| | || || || || | |||| ||||||||| ||||
Sbjct 113927 ATTCCCTTTCATTGGGATCTTTTATGTAAGTGTCGATAAGGAGACCATACATTTCAGAAT 113986
Query 39921 GGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATTTGTACCT 39980
| |||||||| || || || || || || || ||||| | |||| ||||| || | |
Sbjct 113987 GTATGTTTTCCATGGCAATTTGGAAGCCATAGAAACAGCAGCCTTCTGTAATCTGAAGTT 114046
Query 39981 CTGAACAAAATCTTTCCGCCAAATTTTCATTCACTATTCCATCACTAGCGGCAAAAAATG 40040
|| | ||||| ||| |||| |||||||| ||||| |||||||| || |||| || |
Sbjct 114047 CTTGGCTAAATCGCTCCACCAAGTTTTCATTTACTATGCCATCACTTGCTGCAAGGAAAG 114106
Query 40041 CCAATACATGTTTAATAAAATATTTTTCATCGGGTGTCAATTTATTCCAGTCATTGATAT 40100
||| || || ||||| ||| | || || || ||| | ||||| || |
Sbjct 114107 CCAGAACGTGAGATATAAAGTATCTCTCCTCAGGCTTCAGGGATTCCCAGTGCCGTATGT 114166
Query 40101 CTTTTGATATATCTACTTCTTCAGCTGTCCAAAACGACGCCTCTGCCTTTTTGTACATGT 40160
| || || | ||||| || ||||| |||| || || || || ||||| || | ||| |
Sbjct 114167 CCTTGGACAGGTCTACCTCCTCAGCGCTCCAGAAGGAGGCGTCCGCCTTCTTATGCATCT 114226
Query 40161 TCCATATATCACGATATTGTATTGGAAAAATAACAAA 40197
||| || | | || | || || ||||| |||||
Sbjct 114227 GCCAGATGTTGTGGTACTCGATGGGGAAAATGACAAA 114263
>seq630
Length=879232
Score = 304 bits (336), Expect = 2e-77
Identities = 602/889 (68%), Gaps = 13/889 (1%)
Strand=Plus/Plus
Query 39270 TTTAAAAGTCAACATCTAAAGAAAAATGATTATCTTCTTG---TGACATAACTCCCATTT 39326
|||| |||||| |||| || |||| ||| ||| | ||||| ||||||||
Sbjct 417478 TTTAGAAGTCAGCATCCAAGATAAAAGAATTCTCTGTGGGACTTGACACCACTCCCATCC 417537
Query 39327 TTTGGTATTCACCAACGCGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTTT 39386
| | | ||||| || | ||||| || || ||| | || ||||||| || ||||| |
Sbjct 417538 TCTAATGCTCACCTACTCTCTTCTCAAAGAAGTTAATCTTTCCTTCCAGTGGAATATTCT 417597
Query 39387 CCATGAAATCAAACGGATTAGTTGCATTATAtttttttttAAATCCTAATTCTGAAATCA 39446
|||| || ||||| ||||| | | | | || |||| || | ||| || |
Sbjct 417598 CCATAAAGTCAAATGGATTCTCTACTCTGAAAACCTTGCTAAAACCCAGTTCCAGCATAA 417657
Query 39447 ATCTATCTGCAACAAATTCTATGTATGTTTTCATCATTTCACAATTCATTCCTATGAGTT 39506
||| ||||| ||||| || |||||| ||||| | |||||||| || ||||| |
Sbjct 417658 GTCTGTCTGCCACAAACTCAATGTATTGCTTCATTAGAGTGCAATTCATCCCAATGAGCT 417717
Query 39507 TAACTGGTAGAGCCTCCGTTAGAAACTCTTTTTCGATGTCTACGGCCTCTGTTATTATCG 39566
| || || | ||| || || ||||| | ||| || || || | | |||||
Sbjct 417718 TCACAGGCAAGATCTCAGTGAGGAACTCCTGTTCTATCCGAACAGCATTGATAATTATTT 417777
Query 39567 ATGTTACTACCTCATCACTCGGTGGATGCAATAAATGTTTAAACATTAAGCAGGCGAAGT 39626
| || || || || ||| || | || |||| ||||| | ||| || || |
Sbjct 417778 CTCTTTCTCCCGGCTCTGATGGTTTGTGTACTAGGTGTTGGAACATCAGGCAAGCAAAAT 417837
Query 39627 CACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAGGCATTA 39686
|||| |||| ||||||||||| |||| | ||| |||||||||||||| |||||||| |
Sbjct 417838 CACAGTGTAAACCCTCATCTCTGCTAAAAAGTTCATTAGAAAATGTGAGGCCAGGCATCA 417897
Query 39687 GACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATGCCTTCTA 39746
| || || || || ||||| ||||||| ||| ||||| ||||||||||||| |||||| |
Sbjct 417898 GTCCTCGTTTCTTAAGCCAGAATATGGAAGCTAAAGAACCAGAAAAGAAGACGCCTTCCA 417957
Query 39747 CTGCTGCAAATGCAACAAGTCTCTCTCCGTAACTTGTATCATTAT---GTATCCACTTCT 39803
|||| ||||| || ||| || || || | | || || | ||||| |
Sbjct 417958 CTGCAGCAAAGGC----AGT---TCACCATAGGTAGCCTCTTTGTCCCCAATCCAGCGCA 418010
Query 39804 GTGCCCAATCAGCTTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGATAAT 39863
|||| || || |||||||| ||||||||||| ||||| || ||||| |||||| | |
Sbjct 418011 AGGCCCGGTCTGCCTTCTTCTTGACACAAGGCATCGTTTCAATGGCATTGAAGAGAAATT 418070
Query 39864 GTTTTTCATCACTATCTTTAACATATGTATCTATTAACAGACTATACATTTCTGAATGGA 39923
|||| |||||| | ||| || || | | |||||||||||||| ||||| |
Sbjct 418071 CCCTTTCGCTGGGATCTTTTATATACGTGTCAGTAAGGAGACTATACATTTCAGAATGTA 418130
Query 39924 TGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATTTGTACCTCTG 39983
|||| || || | || || ||||| || ||||| | || || ||||| || || |||
Sbjct 418131 TGTTGTCCATGCCAATTTGGAATCCATAGAAACAGCGGGCCTCTGTAATCTGAACTTCTT 418190
Query 39984 AACAAAATCTTTCCGCCAAATTTTCATTCACTATTCCATCACTAGCGGCAAAAAATGCCA 40043
| ||||| ||| |||| |||||||| ||||| || ||||| || ||||| || ||
Sbjct 418191 GGCTAAATCGCTCCACCAAGTTTTCATTTACTATGCCGTCACTTGCTGCAAAGAAACTCA 418250
Query 40044 ATACATGTTTAATAAAATATTTTTCATCGGGTGTCAATTTATTCCAGTCATTGATATCTT 40103
|| || ||||| | | | || ||||| ||| | ||||| || || |
Sbjct 418251 GAACGTGGGATATAAAGTGTCTCTCCTCGGGCTTCAGGGATTCCCAGTGCCGAATGTCCT 418310
Query 40104 TTGATATATCTACTTCTTCAGCTGTCCAAAACGACGCCTCTGCCTTTTT 40152
| || || || ||||| || |||||||| || ||||| | ||| ||
Sbjct 418311 TGGACGGGTCCACCTCTTCGGCGGTCCAAAAGGAGGCCTCCGTCTTGTT 418359
>seq28
Length=17023488
Score = 251 bits (278), Expect = 1e-61
Identities = 609/916 (66%), Gaps = 26/916 (3%)
Strand=Plus/Minus
Query 69593 TAACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATAAAGAGATCTCTGGTTCTAT 69652
||| || |||||| || ||| | | |||||||||||| ||| |||||||||| | |
Sbjct 16623683 TAAGTCATTTCATGAAGAGAGCTGCAATCCAAAGAGC---AAAAAGATCTCTGGCACGCT 16623627
Query 69653 TTTCTTCATTTCCTGTAttttttttAAGATCGAGAAACTCCATAATATCAGAATGCCATG 69712
|||||| ||| || |||| || || | ||| | || || | || || ||||||| |
Sbjct 16623626 GTTCTTCCTTTTCTATATTCTTCTTTAAATCAAAGAATTCAAAGATGTCTAAATGCCAAG 16623567
Query 69713 GTTCTAGATATATCGCCATGACTCCCGGTCGTTTATTTCCTCCCT-GATCTATGTATCTG 69771
| || || || || || | |||| || | || || ||| ||| |||| | ||||
Sbjct 16623566 GCTCCAGGTAAATAGCAAATGCTCCAGGACACTTGTT-CCTACCTCGATCCAGATATCAA 16623508
Query 69772 GCAGTGTTATTATAGACTCTCAGCATCGGAATAATACCATTAGATTTACCATTTGTTCCA 69831
|| ||||| ||||| |||||||||||| | | || ||||| || || ||||| || ||
Sbjct 16623507 GCTGTGTTGTTATATACTCTCAGCATCAGTACAAGGCCATTGGAATTGCCATTCGTCTCA 16623448
Query 69832 GAAATATAACTTCCTCTTGCGCGAATATTACTAATAGATAGACCTATTCCTCCTGCCATT 69891
| ||| || || || | || | |||| ||| | || | ||| |||||||| | |
Sbjct 16623447 GCAATGTAGCTGCCAGTAGCCCAAATACAACTCACAGCAACACCAATTCCTCCACCAGAT 16623388
Query 69892 TTAGAGATTAGAGCACAACGTTTCAATGTGTCATATATACCCTCTATGCTATCATCTATC 69951
||||| || | ||| | | || | |||||||| || || || ||||| |||| | ||
Sbjct 16623387 TTAGAAATCAATGCATATTGCTTTAGAGTGTCATAAATGCCTTCAATGCTGTCATATTTC 16623328
Query 69952 ATGTTAAGAAGAAAACAGCTAGACATTTGATGATGTATAGTTCCCGCATTAAATAATGTA 70011
|| | ||||||||||||||||| | ||| | | || || || | || | ||
Sbjct 16623327 ATACTCAGAAGAAAACAGCTAGAAAGTTGTGGGCAGTTGGTACCAACACTGAAGAGAGTT 16623268
Query 70012 GGAGATGCGTGAGTGAACCATTTTTCAGAAAGCAGATTGT---ATGTTTCAATAGCTGAT 70068
|| || || ||||| ||| | | |||| ||| ||||||| ||||||||| |||
Sbjct 16623267 GGTGAAGCATGAGTAAACTACCTCTCAGGAAGAAGATTGTCTGCTGTTTCAATTGCTACA 16623208
Query 70069 TCTATATCCCACTGATGAATTCCTATCGCGACACGCATCAACATATGCTGAGGTCGTTCT 70128
|| || || | || ||||| | | | | ||||||||||||| | ||| |||
Sbjct 16623207 TCAATGTCTTCTTTGTGGATTCCAACAGATGCTCTCATCAACATATGCCGTGGTATTTCA 16623148
Query 70129 ACCGTTTTATTATTTATTTTCAACAGGTATGATTTTTCCAGAGTTTTAAACCCAAAATAG 70188
|| ||| ||| |||||||||| || || || || ||||| ||||| ||
Sbjct 16623147 GCCACTTTTCCATTGATTTTCAACAAATAAGACCACTCTAGCAACTTAAAACCAAAGTAA 16623088
Query 70189 TTGTATGAAAAGTCTCTTTCGTAAATAATAACAGAATTTAGTTTATCCTTATATTTGG-- 70246
||||| || || ||| || | |||| | ||||||| | | ||| ||| ||||
Sbjct 16623087 TTGTAAGAGAAATCTTGGTCACAGATAACAGCAGAATTCAAGTGATCTTTA---TTGGCC 16623031
Query 70247 -TAACTATATCCATAACAGTAGGTGAGATAATCGGAGATCGTTTACCATTTTTAGGATTA 70305
||| ||||||| | | | | || ||||| ||| |||| | ||| |
Sbjct 16623030 AAAACAATATCCAGTGCTGACTTGGCCACCATGGGAGAGTATTTGTCATTATGTGGACTT 16622971
Query 70306 ACATAGTTGAATAAATCTTCCATTACATCACTAAATAGtttttttGTTTCCTTGTGTAAA 70365
| |||| | | |||||||| |||||||| || | || |||||||| ||||| ||
Sbjct 16622970 ATGCAGTTATACAGGTCTTCCATCACATCACTGAACACTTCATTTGTTTCTTTGTGCAAG 16622911
Query 70366 TTTGATATGGCTATTCTGGCTGCTAGAATAGCATAGTCAGGATGTTGTGTAGTACAAGTA 70425
|| || | || | || ||||| || ||||||||| || | || | ||||| ||||
Sbjct 16622910 TTAGAGACAGCAGTCCTAGCTGCCAGGATAGCATAGACAAGGTGCTTAGTAGT-CAAG-- 16622854
Query 70426 GCTGCTATTTCCGCAGCTAACGTATCTAATTCTATAGTTGTAACTCCGTTATATAGCCCT 70485
| | | ||| || ||||||| ||| || | || || || | || | | |
Sbjct 16622853 GTT---------GTAGCCAAAGTATCTAGTTCCATCATAGTGACCCCACTGTACAAGCAT 16622803
Query 70486 TGAATAACTTTCATGG 70501
|| || ||||||||||
Sbjct 16622802 TGGATTACTTTCATGG 16622787
>seq494
Length=1524325
Score = 149 bits (164), Expect = 9e-31
Identities = 301/439 (69%), Gaps = 12/439 (3%)
Strand=Plus/Minus
Query 39638 CCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAGGCATTAGACCACGCTTT 39697
||||||| || ||||| | ||| || |||||||||| |||| ||| || | | ||
Sbjct 780065 CCCTCATAACTGCTAATAAGTTCATTTAAAAATGTGAGGCCAGACATCAGTCATGGTTTC 780006
Query 39698 TTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATGCCTTCTACTGCTGCAAA- 39756
|||| ||| ||||| | |||||||| || ||| ||||| |||||||||||| |||||
Sbjct 780005 TTGAACCAGAATATCGATGCAAAAGAACCGGAAGAGAAGGTGCCTTCTACTGTGGCAAAG 779946
Query 39757 --TGCAACAAG-TCTCTCTCCGTAACTTGTATCATTATGTATCCACTTCTGTGCCCAATC 39813
||||||| | |||| | ||||| | | | || ||||| | |||||||
Sbjct 779945 GCTGCAACACGTTCTCCGTGGGTAACATCT-TTGTTCACAATCCAACACAAGGCCCAATT 779887
Query 39814 AGCTTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGATAATGTTTTTCATC 39873
|| | |||||| |||| |||||| |||| || ||||| |||||| | | | || | |
Sbjct 779886 TGCCTGCTTCTTGACACTAGGCATCCTTTCAATGGCATTGAAGAGAAACTCTCTTCCTTT 779827
Query 39874 ACTATCTTTAACATATGTATCTATTAACAGACTATACATTTCTGAATGGATGTTTTCAAT 39933
| |||||||| |||| || | || | | ||| ||| || |||| ||||||||| ||
Sbjct 779826 GTTGTCTTTAAC--ATGTGTCAGTAAAGATATTATCCATGTCAGAATAGATGTTTTCCAT 779769
Query 39934 CGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATTTGTACCTC-TGAACAAAATC 39992
|| || || || || | || || | ||| ||| | || || || || ||
Sbjct 779768 AGCAATTTGGAAGCCATTGAAGCA---GGTTTCTGTAGCCTCAACTTCTTGGAC-GCATT 779713
Query 39993 TTTCCGCCAAATTTTCATTCACTATTCCATCACTAGCGGCAAAAAATGCCAATACATGTT 40052
||| |||| |||| || ||||| ||||| | || ||||| || | || | |||
Sbjct 779712 GCTCCACCAAGTTTTTATCAACTATGCCATCGCATGCTGCAAAGAAAGTCAGAATATGGG 779653
Query 40053 TAATAAAATATTTTTCATC 40071
||||||||| |||| ||
Sbjct 779652 ATATAAAATATCTTTCCTC 779634
>seq2
Length=18007423
Score = 147 bits (162), Expect = 3e-30
Identities = 107/124 (86%), Gaps = 0/124 (0%)
Strand=Plus/Minus
Query 39639 CCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAGGCATTAGACCACGCTTTT 39698
|||||||||| ||||| | ||| |||||||||||||| |||||||| || || || || |
Sbjct 1941489 CCTCATCTCTGCTAATAAGTTCATTAGAAAATGTGAGGCCAGGCATCAGTCCTCGTTTCT 1941430
Query 39699 TGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATGCCTTCTACTGCTGCAAATG 39758
||||||| ||||||| |||||||| |||||||||||||||||||||||||| ||||| |
Sbjct 1941429 TGAGCCAGAATATGGATGCAAAAGAACCAGAAAAGAAGATGCCTTCTACTGCAGCAAAGG 1941370
Query 39759 CAAC 39762
| ||
Sbjct 1941369 CTAC 1941366
>seq867
Length=266704
Score = 123 bits (136), Expect = 3e-23
Identities = 257/382 (67%), Gaps = 3/382 (1%)
Strand=Plus/Minus
Query 39270 TTTAAAAGTCAACATCTAAAGAAAAATGATTATCTTCTTG---TGACATAACTCCCATTT 39326
|||| |||||| |||| || | ||||| ||| ||| | | |||||| ||||||||
Sbjct 180931 TTTAGAAGTCAGCATCCAAGGTAAAATAATTCTCTGTTGGACTTGACATCACTCCCATCC 180872
Query 39327 TTTGGTATTCACCAACGCGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTTT 39386
| || || ||||| || | || || || || ||||| || ||||||| ||| ||||| |
Sbjct 180871 TCTGATACTCACCTACTCTCTTTTCAAAGAAGTTAGTCTTTCCTTCCAGTGAAATATTCT 180812
Query 39387 CCATGAAATCAAACGGATTAGTTGCATTATAtttttttttAAATCCTAATTCTGAAATCA 39446
|||| || ||||| ||||| | | | | || |||| || |||| || |
Sbjct 180811 CCATAAAGTCAAATGGATTCTCTACTCTGAAAACCTTGCTAAAACCCGATTCCAGCATAA 180752
Query 39447 ATCTATCTGCAACAAATTCTATGTATGTTTTCATCATTTCACAATTCATTCCTATGAGTT 39506
||||||||| ||||| || |||||| ||||| | ||||||||||| ||||| |
Sbjct 180751 GTCTATCTGCCACAAACTCAATGTATTGCTTCATTAGAGTGCAATTCATTCCGATGAGCT 180692
Query 39507 TAACTGGTAGAGCCTCCGTTAGAAACTCTTTTTCGATGTCTACGGCCTCTGTTATTATCG 39566
| || || ||||| || || ||||| | ||| || || || | | |||||
Sbjct 180691 TCACAGGCGAGGCCTCAGTGAGGAACTCCTGTTCTATCCGAACAGCATTGATAATTATTT 180632
Query 39567 ATGTTACTACCTCATCACTCGGTGGATGCAATAAATGTTTAAACATTAAGCAGGCGAAGT 39626
| ||||| ||| || ||| || | || |||||| |||| | ||| | || |
Sbjct 180631 CTCTTACTCTCTCCTCTGATGGTTTGTGTACTAGATGTTTGAACAACAGGCAAACAAAAT 180572
Query 39627 CACAATGTAGGCCCTCATCTCT 39648
|||| |||| ||| |||||
Sbjct 180571 CACAGTGTAAACCCGATTCTCT 180550
>seq80
Length=8459403
Score = 114 bits (126), Expect = 2e-20
Identities = 126/168 (75%), Gaps = 0/168 (0%)
Strand=Plus/Plus
Query 70334 CACTAAATAGtttttttGTTTCCTTGTGTAAATTTGATATGGCTATTCTGGCTGCTAGAA 70393
|||| || | ||| |||||||| ||||| || || || | ||| || |||||||| || |
Sbjct 1304487 CACTGAACACTTTCTTTGTTTCTTTGTGCAAGTTAGAGACGGCAATCCTGGCTGCCAGGA 1304546
Query 70394 TAGCATAGTCAGGATGTTGTGTAGTACAAGTAGCTGCTATTTCCGCAGCTAACGTATCTA 70453
|||||||||||||||| | ||||| | || || ||| |||| ||||| || |||||||
Sbjct 1304547 TAGCATAGTCAGGATGCTTAGTAGTCAAGGTTGCAGCTGTTTCAGCAGCCAAAGTATCTA 1304606
Query 70454 ATTCTATAGTTGTAACTCCGTTATATAGCCCTTGAATAACTTTCATGG 70501
||| | || || || || | || | ||||| || || |||||||
Sbjct 1304607 GTTCCACCGTGGTGACCCCACTGTACAAGCCTTGGATTACCTTCATGG 1304654
Score = 107 bits (118), Expect = 3e-18
Identities = 142/197 (72%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 68947 GATCCATTATATGTTTCATAAGGTCCTTCCTGTTCAGCTAGTTCACAACTTGCCTCTAAT 69006
|| || | ||| |||||||| ||||| | || | ||| || ||||| || || || ||
Sbjct 1283215 GAGCCCTCATAGGTTTCATATGGTCCATGCTCCTTAGCAAGGTCACAGCTGGCTTCCAAG 1283274
Query 69007 GCACCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGACTATCG 69066
|| ||||||||||| ||||| || |||| |||||| | || |||||| ||| ||
Sbjct 1283275 GCTCCGTAATAAATAGTTTCAAAGATCTGCTTATTCAATAGCTGGGCTTCTGCACTCTCA 1283334
Query 69067 AATGGATAATGTAAAAGAATAAATGCATCTGCCAATCCCTGAACCCCAATACCGATAGGT 69126
|| || || | || ||||| |||||||||| || || |||||||| || || ||
Sbjct 1283335 AAAGGGTATCTCATCAGGATAAAAGCATCTGCCAGACCTTGTACCCCAATTCCAATGGGG 1283394
Query 69127 CTATGTCTCTTATTTGA 69143
| ||| | ||||||||
Sbjct 1283395 CGATGACGTTTATTTGA 1283411
Score = 98.7 bits (108), Expect = 1e-15
Identities = 102/134 (76%), Gaps = 0/134 (0%)
Strand=Plus/Plus
Query 69595 ACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATAAAGAGATCTCTGGTTCTATTT 69654
||||||||||| || ||||| |||||||||||||| | ||| |||||||||| | | |
Sbjct 1289066 ACTCGTTTCATGAAGAGATCCGGAATCCAAAGAGCAAAAAAAAGATCTCTGGCACGCTGT 1289125
Query 69655 TCTTCATTTCCTGTAttttttttAAGATCGAGAAACTCCATAATATCAGAATGCCATGGT 69714
||||| |||||||| || || || | ||| || || || | || || ||||||| ||
Sbjct 1289126 TCTTCCTTTCCTGTGTTCTTCTTTAAATCCAGGAATTCAAAGATGTCTAAATGCCAAGGC 1289185
Query 69715 TCTAGATATATCGC 69728
|| || || || ||
Sbjct 1289186 TCCAGGTAAATAGC 1289199
>seq57
Length=8566406
Score = 111 bits (122), Expect = 2e-19
Identities = 105/134 (78%), Gaps = 0/134 (0%)
Strand=Plus/Plus
Query 39641 TCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAGGCATTAGACCACGCTTTTTG 39700
|||||||| || || | ||| || ||||| |||||||| ||||| ||||| | ||| ||
Sbjct 1418657 TCATCTCTGCTGATGAGTTCATTGGAAAACGTGAGTCCTGGCATAAGACCTCTCTTCTTT 1418716
Query 39701 AGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATGCCTTCTACTGCTGCAAATGCA 39760
||||| ||||| |||||||||||||| || ||||| | |||||||| || || || ||
Sbjct 1418717 AGCCAGAATATAGCAGCAAAAGATCCTGAGAAGAAAACTCCTTCTACAGCAGCGAAGGCC 1418776
Query 39761 ACAAGTCTCTCTCC 39774
|| | ||| || ||
Sbjct 1418777 ACCACTCTTTCCCC 1418790
>seq248
Length=3346475
Score = 100 bits (110), Expect = 4e-16
Identities = 111/148 (75%), Gaps = 0/148 (0%)
Strand=Plus/Minus
Query 39602 TGTTTAAACATTAAGCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCG 39661
||||| ||||| | | | |||||||| |||| |||||| |||| | || | || |
Sbjct 2858666 TGTTTGAACATCAGATAAGAAAAGTCACAGTGTAAACCCTCACCTCTGTTCATAAGTTTG 2858607
Query 39662 TTAGAAAATGTGAGTCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAA 39721
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Sbjct 2858606 TTGAAAAATGTGAGGCCAGACATCAGTCCCCATTTCTTGAGCCAGAATATTGATGCAAAA 2858547
Query 39722 GATCCAGAAAAGAAGATGCCTTCTACTG 39749
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Sbjct 2858546 CAACCACAAAAAAAGATGCCTTCCACTG 2858519
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 686847356007840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |