Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cebus_20capucinus_20imitator_20[refseq_20GCF_5F001604975.1_202016-
04-04] 7,156 sequences; 2,717,703,182 total letters
Query= NC_027923.1
Length=132831
Score E
Sequences producing significant alignments: (Bits) Value
seq683 91.5 1e-13
seq80 84.2 2e-11
>seq683
Length=714717
Score = 91.5 bits (100), Expect = 1e-13
Identities = 163/238 (68%), Gaps = 0/238 (0%)
Strand=Plus/Plus
Query 27016 TATTGCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGT 27075
|| |||| || |||| |||| |||| || | || || ||||| || || |||||||
Sbjct 111371 TAATGCCACCTCGCAGGCGCAGCACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGT 111430
Query 27076 CGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCG 27135
| | |||| | || || |||| ||||||||| | || |||||||| ||||| |
Sbjct 111431 CTGAGAGCGTGCGGCCATCCTCCAGCTATTTACCGGCAAATATCAGACGCTGCTGATCAG 111490
Query 27136 GCGGCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTT 27195
| || | |||||| || || || ||| ||| | | || | ||||| ||| |
Sbjct 111491 GTGGGATACCCTCCTTGTCTTGAATTTTGGCTTTAACATTCTCAATGGTGTCACTGGGCT 111550
Query 27196 CAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATAGCTGC 27253
| || || || || || | |||||| | || || ||||||||||| ||||| ||||
Sbjct 111551 CGACCTCAAGGGTGATGGTCTTGCCCATGAGGGTCTTCACAAAGATCTGCATCTCTGC 111608
>seq80
Length=8459403
Score = 84.2 bits (92), Expect = 2e-11
Identities = 99/134 (74%), Gaps = 0/134 (0%)
Strand=Plus/Plus
Query 131029 AGCCAGGTCGTTGCTAGCTTCCAAAGCTCCGTAATAAATGGTTTCGGCAATTTGTTTATT 131088
||| ||||| ||| |||||||| |||||||||||||| ||||| || || |||||
Sbjct 1283250 AGCAAGGTCACAGCTGGCTTCCAAGGCTCCGTAATAAATAGTTTCAAAGATCTGCTTATT 1283309
Query 131089 TAATTGTTTCGCTTGGTTGCTCTCGTAAGGAAATTTCATTAAAATAAAAGCGTCTGCGAG 131148
||| | | |||| ||||| |||| || |||| | |||||||| ||||| ||
Sbjct 1283310 CAATAGCTGGGCTTCTGCACTCTCAAAAGGGTATCTCATCAGGATAAAAGCATCTGCCAG 1283369
Query 131149 ACCCTGTATCCCAA 131162
||| |||| |||||
Sbjct 1283370 ACCTTGTACCCCAA 1283383
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 424897339877472
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |