Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cebus_20capucinus_20imitator_20[refseq_20GCF_5F001604975.1_202016-
04-04] 7,156 sequences; 2,717,703,182 total letters
Query= NC_028238.1
Length=188534
Score E
Sequences producing significant alignments: (Bits) Value
seq99 95.1 1e-14
>seq99
Length=6617370
Score = 95.1 bits (104), Expect = 1e-14
Identities = 115/157 (73%), Gaps = 0/157 (0%)
Strand=Plus/Minus
Query 32674 TGTGGTTATATTTTATCTCTAAAGGTATAGAATATCTAGATACTATTTTCTTCATAATGA 32733
|||||| || ||| | |||||||| | || ||| | ||||| | || || || |||
Sbjct 1009678 TGTGGTGGTACTTTGTATCTAAAGGAGTTGAGTATTTGGATACAGTGTTTTTTATTCTGA 1009619
Query 32734 GAAAGAAATTTAACCAAGTTAGCTTTTTGCACGTATACCACCATTTTACCATGTTTACTT 32793
|||||||| ||||||||| || | || || || || || | ||| |||||||| |
Sbjct 1009618 GAAAGAAAAACAACCAAGTTTCTTTCCTTCATGTGTATCATCACTGTACGATGTTTACCT 1009559
Query 32794 TAGGATGGATAGGGATTAAATGGTTTGCAGGAGGACA 32830
| | ||||| || ||||||||| ||||||| |||||
Sbjct 1009558 TGTGGTGGATTGGAATTAAATGGGTTGCAGGGGGACA 1009522
Score = 82.4 bits (90), Expect = 9e-11
Identities = 81/105 (77%), Gaps = 0/105 (0%)
Strand=Plus/Minus
Query 32832 GCATTTTTTGGAGCACAGATAAATTCTTTTATACATGTTATAATGTATAGTTATTACGGA 32891
|||||||||||||||||||| ||||| ||||| ||||| || ||||| || || ||
Sbjct 1007974 GCATTTTTTGGAGCACAGATGAATTCCTTTATCCATGTGATTATGTACTCATACTATGGT 1007915
Query 32892 TTAACAGCAATAGGTCCTTCCTTGCGAAAATATCTATGGTGGAAA 32936
||||| ||| | || || | | | |||||||| |||||||||
Sbjct 1007914 TTAACTGCATTTGGCCCATGGATTCAGAAATATCTTTGGTGGAAA 1007870
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 603126845477440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |