Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cebus_20capucinus_20imitator_20[refseq_20GCF_5F001604975.1_202016-
04-04] 7,156 sequences; 2,717,703,182 total letters
Query= NC_031033.1
Length=217124
Score E
Sequences producing significant alignments: (Bits) Value
seq526 392 4e-104
seq630 320 2e-82
seq28 280 2e-70
seq867 154 2e-32
seq2 129 8e-25
seq80 109 8e-19
seq494 93.3 6e-14
seq29 91.5 2e-13
>seq526
Length=1402496
Score = 392 bits (434), Expect = 4e-104
Identities = 655/941 (70%), Gaps = 13/941 (1%)
Strand=Plus/Plus
Query 47790 GTTC-TTTAAAAGTCAACATCTAAAGAAAAATGATTATCTTCTTGA---GACATAACTCC 47845
|||| |||| || ||| || | || | |||| ||| ||| | || ||||| |||||
Sbjct 113327 GTTCATTTAGAAATCAGCACCCAAGGTAAAAGAATTCTCTGTTGGACTTGACATCACTCC 113386
Query 47846 CATTTTTTGATATTCACCCACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATAT 47905
||| | ||||| || || || | ||||| || || ||||| || ||||||| ||| ||
Sbjct 113387 CATCCTCTGATACTCGCCTACTCTCTTCTCAAAGAAGTTAGTCTTTCCTTCCAGTGAAAT 113446
Query 47906 ATTTTCCATAAAATCAAATGGATTAACTGCATTAT--AAAtttttttAAATCCTAATTCT 47963
||| |||||||| ||||||||||| || ||| | ||| || |||| || | |||
Sbjct 113447 ATTCTCCATAAAGTCAAATGGATTCTCT--ATTCTGAAAACCTTGCTAAAACCCAGTTCC 113504
Query 47964 GAAATCAGTCTATCTGCAACGAATTCTATATATCTTTTCATCATTTCACAATTCATTCCT 48023
|| |||| ||||| || || || || ||| ||||| | |||||||| ||
Sbjct 113505 AGCAT--GTCTGTCTGCCACAAACTCAATGTATTGCTTCATTAGAGTGCAATTCATCCCA 113562
Query 48024 ATAAGTTTAACTGGTAGAGCCTCCGTAAGAAACTCTTGTTCGATAGTGACAGCATCCACT 48083
|| || | || || | ||||| ||||||||||||||||| || ||||||| |
Sbjct 113563 ATGAGCTCCACAGGCAAGGCCTCAGTAAGAAACTCTTGTTCTATCCGAACAGCATTGATA 113622
Query 48084 ATTATCGATGTTACCGTTTCCTCACTTGGTGGATACAACAAATGTTTAAACATTAAACAT 48143
|||| | |||| | ||||| |||| | | | ||||| ||||| | ||
Sbjct 113623 GTTATTTCTCTTACTCTCTCCTCTGATGGTTTGTGTACTAGGTGTTTGAACATCAGGCAA 113682
Query 48144 GCAAAATCACAATGAAGACCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGACCG 48203
||||||| | || | ||| |||||||| |||| | || | |||||||||||| ||
Sbjct 113683 GCAAAATGTGAGTGTAAACCCTCATCTCTGCTAAAAAGGTCATGAGAAAATGTGAGGCCA 113742
Query 48204 GGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCGAAAGATCCAGAAAAGAATATG 48263
||||| ||||| | ||| |||||||| ||||| | || ||||| ||||||||| | |||
Sbjct 113743 GGCATCAGTCCTCATTTCTTGAGCCAGAATATGGATGCAAAAGAACCAGAAAAGTAGATG 113802
Query 48264 CCTTCTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTAACTGGCTTCGTTGTGT---ATC 48320
||||| || || ||||| || || | || || || | || || |||| |||
Sbjct 113803 CCTTCCACTGCAGCAAAGGCTACAACGCGTTCACCATAGGTAGCCTCTTTGTCCCCAATC 113862
Query 48321 CACCGTTGTGCCCAATCAGCCTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAG 48380
|| || |||||||| |||||||| || ||||||||||| ||||| || ||||| |||
Sbjct 113863 CAGCGCAAGGCCCAATCTGCCTTCTTGTTGACACAAGGCATCGTTTCAATGGCATTGAAG 113922
Query 48381 AGAAAGtttttttCATTGCTATCTTTAACGTAAGTATCTATTAAAAGACTATACATTTCG 48440
||||| | |||||||| |||||| | |||||| || || | |||| |||||||||
Sbjct 113923 AGAAATTCCCTTTCATTGGGATCTTTTATGTAAGTGTCGATAAGGAGACCATACATTTCA 113982
Query 48441 GAGTGAATATTTTCAATTGCCATCTGAAATCCGTAAAAACATCTCGCTTCTGTGATCTGT 48500
|| || || ||||| || || || || || || || ||||| | ||||||| |||||
Sbjct 113983 GAATGTATGTTTTCCATGGCAATTTGGAAGCCATAGAAACAGCAGCCTTCTGTAATCTGA 114042
Query 48501 ACCTCCGTACAAAATCGTTCAGCCAAATTCTCATTTACTATTCCATCACTAGCAGCAAAA 48560
| || | |||||| || |||| || ||||||||||| |||||||| || ||||
Sbjct 114043 AGTTCTTGGCTAAATCGCTCCACCAAGTTTTCATTTACTATGCCATCACTTGCTGCAAGG 114102
Query 48561 AATGCTAATACATGTTTAATAAAATATTTTTCGTTGGAAGTCAGTTTATTCCAGTCATTG 48620
|| || | || || ||||| ||| | || | | |||| | |||||
Sbjct 114103 AAAGCCAGAACGTGAGATATAAAGTATCTCTCCTCAGGCTTCAGGGATTCCCAGTGCCGT 114162
Query 48621 ATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAATGATGCCTCTGCTTTTTTATAC 48680
|| || || || | ||||| || ||||| |||| || || || || || || |||| |
Sbjct 114163 ATGTCCTTGGACAGGTCTACCTCCTCAGCGCTCCAGAAGGAGGCGTCCGCCTTCTTATGC 114222
Query 48681 ATATTCCATATATCACTGTATTGGATTGGGAAAATAACAAA 48721
|| | ||| || | ||| | ||| |||||||| |||||
Sbjct 114223 ATCTGCCAGATGTTGTGGTACTCGATGGGGAAAATGACAAA 114263
>seq630
Length=879232
Score = 320 bits (354), Expect = 2e-82
Identities = 540/780 (69%), Gaps = 14/780 (2%)
Strand=Plus/Plus
Query 47790 GTTC-TTTAAAAGTCAACATCTAAAGAAAAATGATTATCTTCTTGA---GACATAACTCC 47845
|||| |||| |||||| |||| || |||| ||| ||| || |||| |||||
Sbjct 417473 GTTCATTTAGAAGTCAGCATCCAAGATAAAAGAATTCTCTGTGGGACTTGACACCACTCC 417532
Query 47846 CATTTTTTGATATTCACCCACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATAT 47905
||| | | || ||||| || | ||||| || || ||| | || ||||||| || ||
Sbjct 417533 CATCCTCTAATGCTCACCTACTCTCTTCTCAAAGAAGTTAATCTTTCCTTCCAGTGGAAT 417592
Query 47906 ATTTTCCATAAAATCAAATGGATTAACTGCATTATAAAtttttttAAATCCTAATTCTGA 47965
||| |||||||| ||||||||||| || | | ||| || |||| || | |||
Sbjct 417593 ATTCTCCATAAAGTCAAATGGATTCTCTACTCTGAAAACCTTGCTAAAACCCAGTTCCAG 417652
Query 47966 AATCAGTCTATCTGCAACGAATTCTATATATCTTTTCATCATTTCACAATTCATTCCTAT 48025
|| ||||| ||||| || || || || ||| ||||| | |||||||| || ||
Sbjct 417653 CATAAGTCTGTCTGCCACAAACTCAATGTATTGCTTCATTAGAGTGCAATTCATCCCAAT 417712
Query 48026 AAGTTTAACTGGTAGAGCCTCCGTAAGAAACTCTTGTTCGATAGTGACAGCATCCACTAT 48085
|| || || || | ||| || || ||||| ||||| || ||||||| | ||
Sbjct 417713 GAGCTTCACAGGCAAGATCTCAGTGAGGAACTCCTGTTCTATCCGAACAGCATTGATAAT 417772
Query 48086 TATCGATGTTACCGTTTCCTCACTTGGTGGATACAACAAATGTTTAAACATTAAACATGC 48145
||| | || | ||| |||| | | | |||| ||||| | || ||
Sbjct 417773 TATTTCTCTTTCTCCCGGCTCTGATGGTTTGTGTACTAGGTGTTGGAACATCAGGCAAGC 417832
Query 48146 AAAATCACAATGAAGACCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGACCGGG 48205
||||||||| || | ||| |||||||| |||| | ||| |||||||||||||| || ||
Sbjct 417833 AAAATCACAGTGTAAACCCTCATCTCTGCTAAAAAGTTCATTAGAAAATGTGAGGCCAGG 417892
Query 48206 CATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCGAAAGATCCAGAAAAGAATATGCC 48265
||| ||||| ||||| || ||||| ||||| | || ||||| ||||||||||| | |||
Sbjct 417893 CATCAGTCCTCGTTTCTTAAGCCAGAATATGGAAGCTAAAGAACCAGAAAAGAAGACGCC 417952
Query 48266 TTCTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTAACTGGCTTCGTTGTGT---ATCCA 48322
||| || || ||||| || || || || || | || || |||| |||||
Sbjct 417953 TTCCACTGCAGCAAAGGCAGT-------TCACCATAGGTAGCCTCTTTGTCCCCAATCCA 418005
Query 48323 CCGTTGTGCCCAATCAGCCTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAG 48382
|| |||| || ||||||||||| ||||||||||| ||||| || ||||| |||||
Sbjct 418006 GCGCAAGGCCCGGTCTGCCTTCTTCTTGACACAAGGCATCGTTTCAATGGCATTGAAGAG 418065
Query 48383 AAAGtttttttCATTGCTATCTTTAACGTAAGTATCTATTAAAAGACTATACATTTCGGA 48442
||| | |||| || |||||| | || || || | | |||||||||||||| ||
Sbjct 418066 AAATTCCCTTTCGCTGGGATCTTTTATATACGTGTCAGTAAGGAGACTATACATTTCAGA 418125
Query 48443 GTGAATATTTTCAATTGCCATCTGAAATCCGTAAAAACATCTCGCTTCTGTGATCTGTAC 48502
|| || || || || | || || ||||| || ||||| | || ||||| ||||| ||
Sbjct 418126 ATGTATGTTGTCCATGCCAATTTGGAATCCATAGAAACAGCGGGCCTCTGTAATCTGAAC 418185
Query 48503 CTCCGTACAAAATCGTTCAGCCAAATTCTCATTTACTATTCCATCACTAGCAGCAAAAAA 48562
|| | |||||| || |||| || ||||||||||| || ||||| || ||||| ||
Sbjct 418186 TTCTTGGCTAAATCGCTCCACCAAGTTTTCATTTACTATGCCGTCACTTGCTGCAAAGAA 418245
>seq28
Length=17023488
Score = 280 bits (310), Expect = 2e-70
Identities = 671/1002 (67%), Gaps = 36/1002 (4%)
Strand=Plus/Minus
Query 78001 TAACTCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTAT 78060
||| || |||||| |||||| | | ||||| ||||||| || |||||| || | |
Sbjct 16623683 TAAGTCATTTCATGAAGAGAGCTGCAATCCAAAGAGCAAAAA---GATCTCTGGCACGCT 16623627
Query 78061 GTTCTTCATTTCCTGTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATG 78120
||||||| ||| || ||||||| || | ||| | || || | || || ||||||| |
Sbjct 16623626 GTTCTTCCTTTTCTATATTCTTCTTTAAATCAAAGAATTCAAAGATGTCTAAATGCCAAG 16623567
Query 78121 GTTCTAGATATATTGCCATAACTCCAGGTCGTTTATTACCTCCCT-GATCTATATATCTG 78179
| || || || || || | ||||||| | || || ||| ||| |||| | |||||
Sbjct 16623566 GCTCCAGGTAAATAGCAAATGCTCCAGGACACTTGTT-CCTACCTCGATCCAGATATCAA 16623508
Query 78180 GCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTAGATGTTCCATTTGTTCCA 78239
|| ||||| ||||| ||||||| ||| | | || || || || | ||||| || ||
Sbjct 16623507 GCTGTGTTGTTATATACTCTCAGCATCAGTACAAGGCCATTGGAATTGCCATTCGTCTCA 16623448
Query 78240 GAAATATAACTTCCACTTGCGCGAATATTACTAATGGATATCCCTATTCCTCCTGCCATC 78299
| ||| || || ||| | || | |||| ||| | | | || |||||||| |
Sbjct 16623447 GCAATGTAGCTGCCAGTAGCCCAAATACAACTCACAGCAACACCAATTCCTCCACCAGAT 16623388
Query 78300 TTAGATATTAGAGCGCAACGTTTCAATGTATCGTAGATACCCTCTATACTGTCATCCATC 78359
||||| || | || | | || | || || || || || || || ||||||| ||
Sbjct 16623387 TTAGAAATCAATGCATATTGCTTTAGAGTGTCATAAATGCCTTCAATGCTGTCATATTTC 16623328
Query 78360 ATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTT----CCTGCATTAAATAA 78415
|| | ||||||||||||||||| | ||| || ||||| || || | || |
Sbjct 16623327 ATACTCAGAAGAAAACAGCTAGAAAGTTG----TGGGCAGTTGGTACCAACACTGAAGAG 16623272
Query 78416 TGTCGGAGATGCATGCGTAAACCATTTTTCAGAAAGTAGATTGT---ATGTTTCAATAGC 78472
|| || || ||||| |||||| | | |||| ||| ||||||| ||||||||| ||
Sbjct 16623271 AGTTGGTGAAGCATGAGTAAACTACCTCTCAGGAAGAAGATTGTCTGCTGTTTCAATTGC 16623212
Query 78473 TGATTCTATGTCCCATTGATGAATTCCTACCGCTACACGCATCAACATATGCTGAGGTCT 78532
| || ||||| || || ||||| || | | | | ||||||||||||| | ||| |
Sbjct 16623211 TACATCAATGTCTTCTTTGTGGATTCCAACAGATGCTCTCATCAACATATGCCGTGGTAT 16623152
Query 78533 TTCAACCGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAA 78592
|||| || || ||| ||||||||||| || || || | |||||||||||
Sbjct 16623151 TTCAGCCACTTTTCCATTGATTTTCAACAAATAAGACCACTCTAGCAACTTAAAACCAAA 16623092
Query 78593 ATAGTTGTATGAAAAGTCTCTCTCGTAAATAATAACAGAATTTAGTTTATCTTTGTATTT 78652
|| ||||| || || ||| || | |||| | ||||||| | | ||||| ||||
Sbjct 16623091 GTAATTGTAAGAGAAATCTTGGTCACAGATAACAGCAGAATTCAAGTGATCTT--TATTG 16623034
Query 78653 G--GTAACAATATCCATGACAGTAGTTGAAATAATAGGAGATCGTACACCATTTTTAGGA 78710
| ||||||||||| | | | | | || ||||| | |||| | |||
Sbjct 16623033 GCCAAAACAATATCCAGTGCTGACTTGGCCACCATGGGAGAGTATTTGTCATTATGTGGA 16622974
Query 78711 TTAACATAGTTAAATAAATCTTCCATTACATCACTAAATAGtttttttGTTTCCTTGTGT 78770
| | ||||| | | |||||||| |||||||| || | || |||||||| |||||
Sbjct 16622973 CTTATGCAGTTATACAGGTCTTCCATCACATCACTGAACACTTCATTTGTTTCTTTGTGC 16622914
Query 78771 AGATTAGATACAGCTATTCTTGCAGCTAGAATAGCATAATCAGGATGTTGTGTAGTACAA 78830
| ||||| ||||| | || || || || |||||||| || | || | ||||| |||
Sbjct 16622913 AAGTTAGAGACAGCAGTCCTAGCTGCCAGGATAGCATAGACAAGGTGCTTAGTAGT-CAA 16622855
Query 78831 GTGGCTGCTATTTCTGCCGCTAAAATATCTAACTCTATAGTTGTGACCCCATTATATAGT 78890
|| || || || ||| |||||| || || | ||||||||| | || |
Sbjct 16622854 --GGTTG-TA--------GCCAAAGTATCTAGTTCCATCATAGTGACCCCACTGTACAAG 16622806
Query 78891 CCTTGAATAACTTTCATGGCGATTTTGACAGGATCTACAAACTCAGTGTTCAATCCATAA 78950
| ||| || |||||||||| ||| | | ||||| |||| || | | | |||||||
Sbjct 16622805 CATTGGATTACTTTCATGGTGATCTGAGCGGGATCAACAA--TCCATAATAAGTCCATAA 16622748
Query 78951 CATAATTTTCT-AATACGAGATGTGATTTTATCAAATATAAC 78991
|| || |||| | | |||| | ||||| |||||||| ||
Sbjct 16622747 CA-AAGCTTCTGTGTTCAAGATTTAATTTTGTCAAATATGAC 16622707
>seq867
Length=266704
Score = 154 bits (170), Expect = 2e-32
Identities = 262/378 (69%), Gaps = 4/378 (1%)
Strand=Plus/Minus
Query 47790 GTTC-TTTAAAAGTCAACATCTAAAGAAAAATGATTATCTTCTTGA---GACATAACTCC 47845
|||| |||| |||||| |||| || | ||||| ||| ||| | || ||||| |||||
Sbjct 180936 GTTCATTTAGAAGTCAGCATCCAAGGTAAAATAATTCTCTGTTGGACTTGACATCACTCC 180877
Query 47846 CATTTTTTGATATTCACCCACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATAT 47905
||| | ||||| ||||| || | || || || || ||||| || ||||||| ||| ||
Sbjct 180876 CATCCTCTGATACTCACCTACTCTCTTTTCAAAGAAGTTAGTCTTTCCTTCCAGTGAAAT 180817
Query 47906 ATTTTCCATAAAATCAAATGGATTAACTGCATTATAAAtttttttAAATCCTAATTCTGA 47965
||| |||||||| ||||||||||| || | | ||| || |||| || ||||
Sbjct 180816 ATTCTCCATAAAGTCAAATGGATTCTCTACTCTGAAAACCTTGCTAAAACCCGATTCCAG 180757
Query 47966 AATCAGTCTATCTGCAACGAATTCTATATATCTTTTCATCATTTCACAATTCATTCCTAT 48025
|| ||||||||||| || || || || ||| ||||| | ||||||||||| ||
Sbjct 180756 CATAAGTCTATCTGCCACAAACTCAATGTATTGCTTCATTAGAGTGCAATTCATTCCGAT 180697
Query 48026 AAGTTTAACTGGTAGAGCCTCCGTAAGAAACTCTTGTTCGATAGTGACAGCATCCACTAT 48085
|| || || || ||||| || || ||||| ||||| || ||||||| | ||
Sbjct 180696 GAGCTTCACAGGCGAGGCCTCAGTGAGGAACTCCTGTTCTATCCGAACAGCATTGATAAT 180637
Query 48086 TATCGATGTTACCGTTTCCTCACTTGGTGGATACAACAAATGTTTAAACATTAAACATGC 48145
||| | |||| | ||||| |||| | | | |||||| |||| | || |
Sbjct 180636 TATTTCTCTTACTCTCTCCTCTGATGGTTTGTGTACTAGATGTTTGAACAACAGGCAAAC 180577
Query 48146 AAAATCACAATGAAGACC 48163
||||||||| || | |||
Sbjct 180576 AAAATCACAGTGTAAACC 180559
>seq2
Length=18007423
Score = 129 bits (142), Expect = 8e-25
Identities = 100/119 (84%), Gaps = 0/119 (0%)
Strand=Plus/Minus
Query 48165 TCATCTCTACTAATTAATTCGTTAGAAAATGTGAGACCGGGCATTAGTCCACGTTTTTTG 48224
|||||||| ||||| | ||| |||||||||||||| || ||||| ||||| ||||| |||
Sbjct 1941487 TCATCTCTGCTAATAAGTTCATTAGAAAATGTGAGGCCAGGCATCAGTCCTCGTTTCTTG 1941428
Query 48225 AGCCAAAATATTGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACGGCCGCAAATGC 48283
||||| ||||| | || ||||| ||||||||||| ||||||||||| || ||||| ||
Sbjct 1941427 AGCCAGAATATGGATGCAAAAGAACCAGAAAAGAAGATGCCTTCTACTGCAGCAAAGGC 1941369
Score = 102 bits (112), Expect = 1e-16
Identities = 110/144 (76%), Gaps = 4/144 (3%)
Strand=Plus/Minus
Query 47790 GTTC-TTTAAAAGTCAACATCTAAAGAAAAATGATTATCTTCTTGA---GACATAACTCC 47845
|||| |||| |||||| |||| || | |||| ||| ||| | || ||||| |||||
Sbjct 1943299 GTTCATTTAGAAGTCAGCATCCAAGGTAAAAGAATTCTCTGTTGGACTTGACATCACTCC 1943240
Query 47846 CATTTTTTGATATTCACCCACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATAT 47905
||| | ||||| || || || | ||||| || || ||||| || ||||||| ||| ||
Sbjct 1943239 CATCCTCTGATACTCGCCTACTCTCTTCTCAAAGAAGTTAGTCTTTCCTTCCAGTGAAAT 1943180
Query 47906 ATTTTCCATAAAATCAAATGGATT 47929
||| |||||||| |||||||||||
Sbjct 1943179 ATTCTCCATAAAGTCAAATGGATT 1943156
>seq80
Length=8459403
Score = 109 bits (120), Expect = 8e-19
Identities = 104/133 (78%), Gaps = 0/133 (0%)
Strand=Plus/Plus
Query 77127 TGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGAT 77186
||||||||||| ||||| ||||| ||||| || || || ||||| || ||||| | |||
Sbjct 1278104 TGAAATTCTCCTGACAAGACTCTGCGAGTATAGATGTTGCTGGTGTAAGGTTCAATAGAC 1278163
Query 77187 TCATTGTTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCACCAATAAACTA 77246
||||| || |||| || |||||||| ||||| || ||||| || || | | ||||||
Sbjct 1278164 TCATTATTCCCCAGGATCTGAGCAGTGGAAGCTGTAGGCATCGGGGCAATAAGTAAACTG 1278223
Query 77247 TTTCTGAGACCAT 77259
||||| | |||||
Sbjct 1278224 TTTCTTATACCAT 1278236
Score = 107 bits (118), Expect = 3e-18
Identities = 144/198 (73%), Gaps = 2/198 (1%)
Strand=Plus/Plus
Query 77355 GATCCATTATATGTTTCATAAGGTCCTT-CTGTTTCAGCTAGTTCACAACTCGCTTCCAA 77413
|| || | ||| |||||||| ||||| | || || ||| || ||||| || ||||||||
Sbjct 1283215 GAGCCCTCATAGGTTTCATATGGTCCATGCTCCTT-AGCAAGGTCACAGCTGGCTTCCAA 1283273
Query 77414 TGCTCCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCAATACTATC 77473
|||||||||||||| ||||| || |||| |||||| | || ||||| ||| ||
Sbjct 1283274 GGCTCCGTAATAAATAGTTTCAAAGATCTGCTTATTCAATAGCTGGGCTTCTGCACTCTC 1283333
Query 77474 AAACGGATAATGTAAAAGAATAAAGGCATCTGCTAATCCCTGAACTCCAATACCAATAGG 77533
||| || || | || ||||| |||||||| | || || || ||||| ||||| ||
Sbjct 1283334 AAAAGGGTATCTCATCAGGATAAAAGCATCTGCCAGACCTTGTACCCCAATTCCAATGGG 1283393
Query 77534 TCTATGTCTCTTATTGGA 77551
| ||| | ||||| ||
Sbjct 1283394 GCGATGACGTTTATTTGA 1283411
Score = 105 bits (116), Expect = 9e-18
Identities = 108/141 (77%), Gaps = 0/141 (0%)
Strand=Plus/Plus
Query 78399 GTTCCTGCATTAAATAATGTCGGAGATGCATGCGTAAACCATTTTTCAGAAAGTAGATTG 78458
|| || ||||| || | || || || ||||| |||||||| | |||||||| |||||
Sbjct 1298277 GTACCAGCATTGAAGAGAGTGGGTGAAGCATGAGTAAACCACCTCTCAGAAAGAAGATTA 1298336
Query 78459 TATGTTTCAATAGCTGATTCTATGTCCCATTGATGAATTCCTACCGCTACACGCATCAAC 78518
||||||||||| |||| || ||||| || || || || || | ||| | |||||||
Sbjct 1298337 TATGTTTCAATTGCTGCATCAATGTCTTCTTTGTGGATCCCAACAGATACTCTCATCAAC 1298396
Query 78519 ATATGCTGAGGTCTTTCAACC 78539
|||||||| ||||||||| ||
Sbjct 1298397 ATATGCTGTGGTCTTTCAGCC 1298417
Score = 102 bits (112), Expect = 1e-16
Identities = 103/134 (77%), Gaps = 0/134 (0%)
Strand=Plus/Plus
Query 78003 ACTCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGT 78062
||||||||||| |||||||| || ||||| ||||||| ||| ||||||| || | |||
Sbjct 1289066 ACTCGTTTCATGAAGAGATCCGGAATCCAAAGAGCAAAAAAAAGATCTCTGGCACGCTGT 1289125
Query 78063 TCTTCATTTCCTGTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGT 78122
||||| |||||||| ||||| || | ||| || || || | || || ||||||| ||
Sbjct 1289126 TCTTCCTTTCCTGTGTTCTTCTTTAAATCCAGGAATTCAAAGATGTCTAAATGCCAAGGC 1289185
Query 78123 TCTAGATATATTGC 78136
|| || || || ||
Sbjct 1289186 TCCAGGTAAATAGC 1289199
>seq494
Length=1524325
Score = 93.3 bits (102), Expect = 6e-14
Identities = 100/132 (76%), Gaps = 3/132 (2%)
Strand=Plus/Plus
Query 47785 TTATGGTTCTTTAAAAGTCAACATCTAAAGAAAAATGATTATCTTCTTGA---GACATAA 47841
||| | || |||| |||||| |||| |||| |||| ||||||| || | ||||| |
Sbjct 779243 TTAAGCTTGTTTAGAAGTCAGCATCCAAAGTAAAAGAATTATCTATTTTACTTGACATCA 779302
Query 47842 CTCCCATTTTTTGATATTCACCCACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATG 47901
|| |||| |||||||||||||| || | ||||| || || ||| | || ||||||| ||
Sbjct 779303 CTGCCATCTTTTGATATTCACCTACTCTCTTCTCAAAGAACTTAATCTTTCCTTCCAGTG 779362
Query 47902 ATATATTTTCCA 47913
| || || ||||
Sbjct 779363 AAATGTTCTCCA 779374
>seq29
Length=11376298
Score = 91.5 bits (100), Expect = 2e-13
Identities = 241/361 (67%), Gaps = 19/361 (5%)
Strand=Plus/Minus
Query 45877 CCAGTGGATCCAAATCCT--TGAGCGTCTCTTTCAGTACCATCTAGAGATTGCACTTCCT 45934
|||||||| ||||| | | ||| | | |||| || |||| | || ||| ||||| |
Sbjct 50145 CCAGTGGAACCAAAACTTCCTGAAC--CCCTTTTGGTGTCATCCAAAGCTTGAACTTCTT 50088
Query 45935 TCAGATCAGGATAATATATACGTTGATAGATTAGTTGAGCTATTCTATCACCCGTATTTA 45994
| || || ||| | || | || | | | || || || |||| |||||| | ||
Sbjct 50087 CTATTTCTGGGTAAAAAATCCATTCACAAACGAGCTGTGCAATTCGATCACCTTTTTTGG 50028
Query 45995 TTTCAAATATATCTTTTCCATTATTGATCAGAATGACTCCAATTGTCCCTCTATAATCTT 46054
|||||| | ||||| ||| ||| | ||| | || ||| | |||||||||||||
Sbjct 50027 CTTCAAACTTTTCTTTGCCAAAATTAAACAGTACAACACCAGCATTTCCTCTATAATCTT 49968
Query 46055 CATCTATTACTCCCCCTCCCACATCGATA---CCTTTTAGAGACAGTCCAGATCTAGGAG 46111
||||||| || || ||| ||||| ||| |||| || || ||||| | ||||
Sbjct 49967 CATCTATGACACCAGATCCTACATCAATAAAGTGTTTTGCAGCCAAGCCAGACCATGGAG 49908
Query 46112 CTATTCTTCCATAA----CAGAATTTGGGCATAGACATCCGAATATCTGTTTTAATCAAT 46167
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Sbjct 49907 CTACTCTTCAGTAACACCCAGAA----GGAAGCGCTATCTGTATATCTGTTTTCA-CAA- 49854
Query 46168 CTCCTTTCTCC--AGGAGGGATAGTATAGTCGTACGCACTGTATAAATCATATCCTGCTG 46225
|||||||| ||| || || | || || || |||||||| | || || ||||| |
Sbjct 49853 GAGCTTTCTCCATAGGTGGTATTCTGTAATCATAGGCACTGTACAGGTCGTAGCCTGCGG 49794
Query 46226 C 46226
|
Sbjct 49793 C 49793
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 694606661875840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |