Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cebus_20capucinus_20imitator_20[refseq_20GCF_5F001604975.1_202016-
04-04] 7,156 sequences; 2,717,703,182 total letters
Query= NC_031038.1
Length=222832
Score E
Sequences producing significant alignments: (Bits) Value
seq526 378 1e-99
seq630 298 8e-76
seq28 246 4e-60
seq867 147 3e-30
seq2 125 1e-23
seq57 111 2e-19
seq80 109 8e-19
seq29 89.7 7e-13
seq494 87.8 3e-12
>seq526
Length=1402496
Score = 378 bits (418), Expect = 1e-99
Identities = 624/895 (70%), Gaps = 13/895 (1%)
Strand=Plus/Plus
Query 46323 TGACATAACTCCCATTTTTTGGTATTCACCTACACGTTTCTCGAAAAAATTAGTTTTGCC 46382
|||||| |||||||| | || || || ||||| | ||||| || || ||||| || ||
Sbjct 113375 TGACATCACTCCCATCCTCTGATACTCGCCTACTCTCTTCTCAAAGAAGTTAGTCTTTCC 113434
Query 46383 TTCCAATGATATATTTTCCATAAAATCAAACGGATTAGTAACATTATAAAtttttttAAA 46442
||||| ||| ||||| |||||||| ||||| ||||| | | ||| || ||||
Sbjct 113435 TTCCAGTGAAATATTCTCCATAAAGTCAAATGGATTCTCTATTCTGAAAACCTTGCTAAA 113494
Query 46443 TCCTAATTCTGAAATCAGTCTATCTGCAACGAATTCTATATACGTTTTCATCATTTCA-- 46500
|| | ||| || |||| ||||| || || || || || || | ||||| |
Sbjct 113495 ACCCAGTTCCAGCAT--GTCTGTCTGCCACAAACTCAATGTA---TTGCTTCATTAGAGT 113549
Query 46501 -CAATTCATTCCTATGAGTTTGACCGGTAGAGCCTCCGTAAGAAACTCTTGTTCAATAGT 46559
|||||||| || ||||| | || || | ||||| ||||||||||||||||| ||
Sbjct 113550 GCAATTCATCCCAATGAGCTCCACAGGCAAGGCCTCAGTAAGAAACTCTTGTTCTATCCG 113609
Query 46560 GACAGCATCCGATA-TTATCGATGTTACTGTTTCCTCACTTGGTGGATGCATCAAATGTT 46618
||||||| |||| |||| | ||||| | ||||| |||| || | | ||||
Sbjct 113610 AACAGCATT-GATAGTTATTTCTCTTACTCTCTCCTCTGATGGTTTGTGTACTAGGTGTT 113668
Query 46619 TAAACATTAAACATGCAAAATCACAATGAAGGCCTTCATCTCTACTAATTAATTCGTTAG 46678
| ||||| | || ||||||| | || | || |||||||| |||| | || | ||
Sbjct 113669 TGAACATCAGGCAAGCAAAATGTGAGTGTAAACCCTCATCTCTGCTAAAAAGGTCATGAG 113728
Query 46679 AAAATGTGAGCCCAGGCATTAGTCCACGCTTTTTGAGCCAAAATATAGCCGCGAAAGATC 46738
|||||||||| |||||||| ||||| | || |||||||| ||||| | || ||||| |
Sbjct 113729 AAAATGTGAGGCCAGGCATCAGTCCTCATTTCTTGAGCCAGAATATGGATGCAAAAGAAC 113788
Query 46739 CAGAAAAGAATATGCCTTCTACAGCCGCGAATGCGACAAGTCTCTCTCCGTAACTGGCAT 46798
|||||||| | |||||||| || || || || || |||| | || || || | || |
Sbjct 113789 CAGAAAAGTAGATGCCTTCCACTGCAGCAAAGGCTACAACGCGTTCACCATAGGTAGCCT 113848
Query 46799 CATTATG---AATCCACCTTTGAGCCCAATCAGCCTTTTTCTTTACACAAGGCATTGTTT 46855
| || | |||||| | |||||||| ||||| || || ||||||||||| ||||
Sbjct 113849 CTTTGTCCCCAATCCAGCGCAAGGCCCAATCTGCCTTCTTGTTGACACAAGGCATCGTTT 113908
Query 46856 CTATAGCATTAAAGAGAAAGtttttttCATCACTATCTTTAACATATGTATCTATTAAAA 46915
| || ||||| |||||||| | |||||| |||||| | || || || || | |
Sbjct 113909 CAATGGCATTGAAGAGAAATTCCCTTTCATTGGGATCTTTTATGTAAGTGTCGATAAGGA 113968
Query 46916 GACTATACATTTCTGAATGAATGTTTTCAATAGCCATCTGAAATCCGTAAAAACATCTTG 46975
||| ||||||||| ||||| |||||||| || || || || || || || ||||| |
Sbjct 113969 GACCATACATTTCAGAATGTATGTTTTCCATGGCAATTTGGAAGCCATAGAAACAGCAGC 114028
Query 46976 CTTCAGTAATCTGTACCTCTGTACAAAATCGTTCAGACAAATTCTCATTCACTATTCCAT 47035
|||| |||||||| | ||| | |||||| || ||| || ||||| ||||| ||||
Sbjct 114029 CTTCTGTAATCTGAAGTTCTTGGCTAAATCGCTCCACCAAGTTTTCATTTACTATGCCAT 114088
Query 47036 CACTAGCAGCAAAAAATGCCAATACATGTTTAATAAAATATTTTTCATCGGTAGTCAGTT 47095
|||| || |||| || |||| || || ||||| ||| | || || | ||||
Sbjct 114089 CACTTGCTGCAAGGAAAGCCAGAACGTGAGATATAAAGTATCTCTCCTCAGGCTTCAGGG 114148
Query 47096 TATTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAGAATGACGCCT 47155
| ||||| || || || || | ||||| || ||||| ||||||| || || |
Sbjct 114149 ATTCCCAGTGCCGTATGTCCTTGGACAGGTCTACCTCCTCAGCGCTCCAGAAGGAGGCGT 114208
Query 47156 CTGCTTTTTTATACATATTCCATATATCACGATATTGGATCGGAAAAATAACAAA 47210
| || || |||| ||| | ||| || | | || | ||| || ||||| |||||
Sbjct 114209 CCGCCTTCTTATGCATCTGCCAGATGTTGTGGTACTCGATGGGGAAAATGACAAA 114263
>seq630
Length=879232
Score = 298 bits (330), Expect = 8e-76
Identities = 581/851 (68%), Gaps = 19/851 (2%)
Strand=Plus/Plus
Query 46323 TGACATAACTCCCATTTTTTGGTATTCACCTACACGTTTCTCGAAAAAATTAGTTTTGCC 46382
||||| |||||||| | | | |||||||| | ||||| || || ||| | || ||
Sbjct 417521 TGACACCACTCCCATCCTCTAATGCTCACCTACTCTCTTCTCAAAGAAGTTAATCTTTCC 417580
Query 46383 TTCCAATGATATATTTTCCATAAAATCAAACGGATTAGTAACATTATAAAtttttttAAA 46442
||||| || ||||| |||||||| ||||| ||||| || | ||| || ||||
Sbjct 417581 TTCCAGTGGAATATTCTCCATAAAGTCAAATGGATTCTCTACTCTGAAAACCTTGCTAAA 417640
Query 46443 TCCTAATTCTGAAATCAGTCTATCTGCAACGAATTCTATATACGTTTTCATCATTTCA-- 46500
|| | ||| || ||||| ||||| || || || || || || | ||||| |
Sbjct 417641 ACCCAGTTCCAGCATAAGTCTGTCTGCCACAAACTCAATGTA---TTGCTTCATTAGAGT 417697
Query 46501 -CAATTCATTCCTATGAGTTTGACCGGTAGAGCCTCCGTAAGAAACTCTTGTTCAATAGT 46559
|||||||| || ||||| || || || | ||| || || ||||| ||||| ||
Sbjct 417698 GCAATTCATCCCAATGAGCTTCACAGGCAAGATCTCAGTGAGGAACTCCTGTTCTATCCG 417757
Query 46560 GACAGCATCCGATA-TTATCGATGTTACTGTTTCCTCACTTGGTGGATGCATCAAATGTT 46618
||||||| |||| |||| | || || ||| |||| || | | ||||
Sbjct 417758 AACAGCATT-GATAATTATTTCTCTTTCTCCCGGCTCTGATGGTTTGTGTACTAGGTGTT 417816
Query 46619 TAAACATTAAACATGCAAAATCACAATGAAGGCCTTCATCTCTACTAATTAATTCGTTAG 46678
||||| | || ||||||||||| || | || |||||||| |||| | ||| ||||
Sbjct 417817 GGAACATCAGGCAAGCAAAATCACAGTGTAAACCCTCATCTCTGCTAAAAAGTTCATTAG 417876
Query 46679 AAAATGTGAGCCCAGGCATTAGTCCACGCTTTTTGAGCCAAAATATAGCCGCGAAAGATC 46738
|||||||||| |||||||| ||||| || || || ||||| ||||| | || ||||| |
Sbjct 417877 AAAATGTGAGGCCAGGCATCAGTCCTCGTTTCTTAAGCCAGAATATGGAAGCTAAAGAAC 417936
Query 46739 CAGAAAAGAATATGCCTTCTACAGCCGCGAATGCGACAAGTCTCTCTCCGTAACTGGCAT 46798
|||||||||| | |||||| || || || || || ||| || || || | || |
Sbjct 417937 CAGAAAAGAAGACGCCTTCCACTGCAGCAAAGGC----AGT---TCACCATAGGTAGCCT 417989
Query 46799 CATTATG---AATCCACCTTTGAGCCCAATCAGCCTTTTTCTTTACACAAGGCATTGTTT 46855
| || | |||||| | |||| || ||||| ||||| ||||||||||| ||||
Sbjct 417990 CTTTGTCCCCAATCCAGCGCAAGGCCCGGTCTGCCTTCTTCTTGACACAAGGCATCGTTT 418049
Query 46856 CTATAGCATTAAAGAGAAAGtttttttCATCACTATCTTTAACATATGTATCTATTAAAA 46915
| || ||||| |||||||| | |||| |||||| | ||| || || | | |
Sbjct 418050 CAATGGCATTGAAGAGAAATTCCCTTTCGCTGGGATCTTTTATATACGTGTCAGTAAGGA 418109
Query 46916 GACTATACATTTCTGAATGAATGTTTTCAATAGCCATCTGAAATCCGTAAAAACATCTTG 46975
||||||||||||| ||||| ||||| || || | || || ||||| || ||||| | |
Sbjct 418110 GACTATACATTTCAGAATGTATGTTGTCCATGCCAATTTGGAATCCATAGAAACAGCGGG 418169
Query 46976 CTTCAGTAATCTGTACCTCTGTACAAAATCGTTCAGACAAATTCTCATTCACTATTCCAT 47035
| || |||||||| || ||| | |||||| || ||| || ||||| ||||| || |
Sbjct 418170 CCTCTGTAATCTGAACTTCTTGGCTAAATCGCTCCACCAAGTTTTCATTTACTATGCCGT 418229
Query 47036 CACTAGCAGCAAAAAATGCCAATACATGTTTAATAAAATATTTTTCATCGGTAGTCAGTT 47095
|||| || ||||| || || || || ||||| | | | || |||| ||||
Sbjct 418230 CACTTGCTGCAAAGAAACTCAGAACGTGGGATATAAAGTGTCTCTCCTCGGGCTTCAGGG 418289
Query 47096 TATTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAGAATGACGCCT 47155
| ||||| || || || || || || ||||| || ||||| || || ||||
Sbjct 418290 ATTCCCAGTGCCGAATGTCCTTGGACGGGTCCACCTCTTCGGCGGTCCAAAAGGAGGCCT 418349
Query 47156 CTG-CTTTTTT 47165
| | ||| |||
Sbjct 418350 CCGTCTTGTTT 418360
>seq28
Length=17023488
Score = 246 bits (272), Expect = 4e-60
Identities = 659/998 (66%), Gaps = 42/998 (4%)
Strand=Plus/Minus
Query 76603 TTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTACGTTCTTC 76662
|||||| |||||| | | ||||| ||||||| || |||||| || | |||||||
Sbjct 16623676 TTTCATGAAGAGAGCTGCAATCCAAAGAGCAAAAA---GATCTCTGGCACGCTGTTCTTC 16623620
Query 76663 ATTTCCTGTATTCTTTTTAAGATCTAGGAACTCCATAATATCAGAATGCCATGGTTCTAG 76722
||| || ||||||| || | ||| | ||| || | || || ||||||| || || ||
Sbjct 16623619 CTTTTCTATATTCTTCTTTAAATCAAAGAATTCAAAGATGTCTAAATGCCAAGGCTCCAG 16623560
Query 76723 ATATATCGCCATAACACCCGGTCGTTTATTACCTCCCT-GATCTATATATCTGGCAGTGT 76781
|| || || | | || || | || || ||| ||| |||| | ||||| || ||||
Sbjct 16623559 GTAAATAGCAAATGCTCCAGGACACTTGTT-CCTACCTCGATCCAGATATCAAGCTGTGT 16623501
Query 76782 TATTATAAACTCTCAACATTGGAATAATGCCGTTAGATGTACCATTTGTTCCAGAAATAT 76841
| ||||| ||||||| ||| | | || ||| || || | ||||| || ||| ||| |
Sbjct 16623500 TGTTATATACTCTCAGCATCAGTACAAGGCCATTGGAATTGCCATTCGTCTCAGCAATGT 16623441
Query 76842 AACTTCCACATGCACGAATATTACTAATAGATAGGCCTATTCCTCCTGCCATTTTAGAGA 76901
| || ||| || | |||| ||| | || | || |||||||| | |||||| |
Sbjct 16623440 AGCTGCCAGTAGCCCAAATACAACTCACAGCAACACCAATTCCTCCACCAGATTTAGAAA 16623381
Query 76902 TTAGAGCACAGCGTTTCAATGTGTCATAGATGCCCTCTATACTATCATCCATCATGTTAA 76961
| | ||| | | || | |||||||| ||||| || || || |||| |||| | |
Sbjct 16623380 TCAATGCATATTGCTTTAGAGTGTCATAAATGCCTTCAATGCTGTCATATTTCATACTCA 16623321
Query 76962 GAAGAAAACAGCTAGACATTTGATGATGAACAGTT----CCTGCATTAAACAATGTAGGA 77017
|||||||||||||||| | ||| || ||||| || || | || | || ||
Sbjct 16623320 GAAGAAAACAGCTAGAAAGTTG----TGGGCAGTTGGTACCAACACTGAAGAGAGTTGGT 16623265
Query 77018 GATGCATGAGTGAACCATTTTTCAGAAAGTAGATTGT---ATGTTTCAATAACTGCTTCT 77074
|| |||||||| ||| | | |||| ||| ||||||| ||||||||| || | ||
Sbjct 16623264 GAAGCATGAGTAAACTACCTCTCAGGAAGAAGATTGTCTGCTGTTTCAATTGCTACATCA 16623205
Query 77075 ATATCCCATTGATGAATTCCTACAGCGACACGCATCAACATATGCTGAGGTCGTTCTACA 77134
|| || || || ||||| |||| | | ||||||||||||| | ||| ||| |
Sbjct 16623204 ATGTCTTCTTTGTGGATTCCAACAGATGCTCTCATCAACATATGCCGTGGTATTTCAGCC 16623145
Query 77135 GTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTG 77194
|| ||| ||||||||||| || || || | ||||||||||| || |||
Sbjct 16623144 ACTTTTCCATTGATTTTCAACAAATAAGACCACTCTAGCAACTTAAAACCAAAGTAATTG 16623085
Query 77195 TATGAAAAGTCTCTTTCGTAAATAATAACCGAATTTAGTTTGTCCTTATATTTGG---TA 77251
|| || || ||| || | |||| | | ||||| | | || ||| |||| |
Sbjct 16623084 TAAGAGAAATCTTGGTCACAGATAACAGCAGAATTCAAGTGATCTTTA---TTGGCCAAA 16623028
Query 77252 ACAATATCCATGACAGTGGTAGAAATAATTGGAGATCGTATT--CCATTTTTAGGATTAA 77309
|||||||||| | | | | | || ||||| ||||| |||| | ||| | |
Sbjct 16623027 ACAATATCCAGTGCTGACTTGGCCACCATGGGAGA--GTATTTGTCATTATGTGGACTTA 16622970
Query 77310 CATAGTTAAATAAGTCTTCCATTACGTCGCTAAATAGtttttttGTTTCCTTGTGTAGAT 77369
||||| | | ||||||||| || || || || | || |||||||| ||||| | |
Sbjct 16622969 TGCAGTTATACAGGTCTTCCATCACATCACTGAACACTTCATTTGTTTCTTTGTGCAAGT 16622910
Query 77370 TCGATACGGCTATTCTAGCAGCTAGAATTGCATAGTCAGGATGTTGTGTAGTGCAGGTGG 77429
| || || || | ||||| || || || |||||| || | || | ||||| ||||
Sbjct 16622909 TAGAGACAGCAGTCCTAGCTGCCAGGATAGCATAGACAAGGTGCTTAGTAGTCAAGGT-- 16622852
Query 77430 CTGCTATTTCTGCCGCTAAAGTATCTAATTCTATAGTAGTAACTCCGTTATATAGCCCTT 77489
|| || |||||||||| ||| || |||| || || | || | | ||
Sbjct 16622851 ----------TGTAGCCAAAGTATCTAGTTCCATCATAGTGACCCCACTGTACAAGCATT 16622802
Query 77490 GAATAACTTTCATGGCTATTTTGATAGGATCTACAAACTCGGTGTTCAAACCATAACATA 77549
| || |||||||||| || | ||||| |||| || | | | |||||||| |
Sbjct 16622801 GGATTACTTTCATGGTGATCTGAGCGGGATCAACAA--TCCATAATAAGTCCATAACA-A 16622745
Query 77550 ATTTTCT-AATACGAGATGTGATTTTATCAAACATGAC 77586
| |||| | | |||| | ||||| ||||| |||||
Sbjct 16622744 AGCTTCTGTGTTCAAGATTTAATTTTGTCAAATATGAC 16622707
>seq867
Length=266704
Score = 147 bits (162), Expect = 3e-30
Identities = 258/371 (70%), Gaps = 11/371 (3%)
Strand=Plus/Minus
Query 46283 TTTAAAAGTCGACATCTAAAGAAAAATGATTATCTTCTTG---TGACATAACTCCCATTT 46339
|||| ||||| |||| || | ||||| ||| ||| | | |||||| ||||||||
Sbjct 180931 TTTAGAAGTCAGCATCCAAGGTAAAATAATTCTCTGTTGGACTTGACATCACTCCCATCC 180872
Query 46340 TTTGGTATTCACCTACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTTT 46399
| || || |||||||| | || || || || ||||| || ||||||| ||| ||||| |
Sbjct 180871 TCTGATACTCACCTACTCTCTTTTCAAAGAAGTTAGTCTTTCCTTCCAGTGAAATATTCT 180812
Query 46400 CCATAAAATCAAACGGATTAGTAACATTATAAAtttttttAAATCCTAATTCTGAAATCA 46459
||||||| ||||| ||||| || | ||| || |||| || |||| || |
Sbjct 180811 CCATAAAGTCAAATGGATTCTCTACTCTGAAAACCTTGCTAAAACCCGATTCCAGCATAA 180752
Query 46460 GTCTATCTGCAACGAATTCTATATACGTTTTCATCATTTCA---CAATTCATTCCTATGA 46516
|||||||||| || || || || || || | ||||| | ||||||||||| ||||
Sbjct 180751 GTCTATCTGCCACAAACTCAATGTA---TTGCTTCATTAGAGTGCAATTCATTCCGATGA 180695
Query 46517 GTTTGACCGGTAGAGCCTCCGTAAGAAACTCTTGTTCAATAGTGACAGCATCCGAT-ATT 46575
| || || || ||||| || || ||||| ||||| || ||||||| ||| |||
Sbjct 180694 GCTTCACAGGCGAGGCCTCAGTGAGGAACTCCTGTTCTATCCGAACAGCAT-TGATAATT 180636
Query 46576 ATCGATGTTACTGTTTCCTCACTTGGTGGATGCATCAAATGTTTAAACATTAAACATGCA 46635
|| | ||||| | ||||| |||| || | | |||||| |||| | || ||
Sbjct 180635 ATTTCTCTTACTCTCTCCTCTGATGGTTTGTGTACTAGATGTTTGAACAACAGGCAAACA 180576
Query 46636 AAATCACAATG 46646
|||||||| ||
Sbjct 180575 AAATCACAGTG 180565
>seq2
Length=18007423
Score = 125 bits (138), Expect = 1e-23
Identities = 101/122 (83%), Gaps = 0/122 (0%)
Strand=Plus/Minus
Query 46654 TCATCTCTACTAATTAATTCGTTAGAAAATGTGAGCCCAGGCATTAGTCCACGCTTTTTG 46713
|||||||| ||||| | ||| |||||||||||||| |||||||| ||||| || || |||
Sbjct 1941487 TCATCTCTGCTAATAAGTTCATTAGAAAATGTGAGGCCAGGCATCAGTCCTCGTTTCTTG 1941428
Query 46714 AGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACAGCCGCGAATGCG 46773
||||| ||||| | || ||||| ||||||||||| ||||||||||| || || || ||
Sbjct 1941427 AGCCAGAATATGGATGCAAAAGAACCAGAAAAGAAGATGCCTTCTACTGCAGCAAAGGCT 1941368
Query 46774 AC 46775
||
Sbjct 1941367 AC 1941366
>seq57
Length=8566406
Score = 111 bits (122), Expect = 2e-19
Identities = 106/136 (78%), Gaps = 0/136 (0%)
Strand=Plus/Plus
Query 46652 CTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGCCCAGGCATTAGTCCACGCTTTT 46711
|||||||||| || || | ||| || ||||| ||||| || ||||| || || | ||| |
Sbjct 1418655 CTTCATCTCTGCTGATGAGTTCATTGGAAAACGTGAGTCCTGGCATAAGACCTCTCTTCT 1418714
Query 46712 TGAGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACAGCCGCGAATG 46771
| ||||| |||||||| || |||||||| || ||||| | ||||||||||| ||||| |
Sbjct 1418715 TTAGCCAGAATATAGCAGCAAAAGATCCTGAGAAGAAAACTCCTTCTACAGCAGCGAAGG 1418774
Query 46772 CGACAAGTCTCTCTCC 46787
| || | ||| || ||
Sbjct 1418775 CCACCACTCTTTCCCC 1418790
>seq80
Length=8459403
Score = 109 bits (120), Expect = 8e-19
Identities = 104/133 (78%), Gaps = 0/133 (0%)
Strand=Plus/Plus
Query 75722 TGAAATTCTCCAGACAATACTCTTCGAGTGTAAATATTACTGGTATATGGTTCCACAGAT 75781
||||||||||| ||||| ||||| ||||| || || || ||||| || ||||| | |||
Sbjct 1278104 TGAAATTCTCCTGACAAGACTCTGCGAGTATAGATGTTGCTGGTGTAAGGTTCAATAGAC 1278163
Query 75782 TCATTGTTTCCCAAAATTTGAGCAGTTGAAGCAGTCGGCATAGGTGCCACCAATAAACTA 75841
||||| || |||| || |||||||| ||||| || ||||| || || | | ||||||
Sbjct 1278164 TCATTATTCCCCAGGATCTGAGCAGTGGAAGCTGTAGGCATCGGGGCAATAAGTAAACTG 1278223
Query 75842 TTTCTGAGACCAT 75854
||||| | |||||
Sbjct 1278224 TTTCTTATACCAT 1278236
Score = 102 bits (112), Expect = 1e-16
Identities = 122/166 (73%), Gaps = 0/166 (0%)
Strand=Plus/Plus
Query 77339 CTAAATAGtttttttGTTTCCTTGTGTAGATTCGATACGGCTATTCTAGCAGCTAGAATT 77398
|| || | ||| |||||||| ||||| | || || ||||| || || || || || ||
Sbjct 1304489 CTGAACACTTTCTTTGTTTCTTTGTGCAAGTTAGAGACGGCAATCCTGGCTGCCAGGATA 1304548
Query 77399 GCATAGTCAGGATGTTGTGTAGTGCAGGTGGCTGCTATTTCTGCCGCTAAAGTATCTAAT 77458
|||||||||||||| | ||||| |||| || ||| |||| || || |||||||||| |
Sbjct 1304549 GCATAGTCAGGATGCTTAGTAGTCAAGGTTGCAGCTGTTTCAGCAGCCAAAGTATCTAGT 1304608
Query 77459 TCTATAGTAGTAACTCCGTTATATAGCCCTTGAATAACTTTCATGG 77504
|| | || || || || | || | ||||| || || |||||||
Sbjct 1304609 TCCACCGTGGTGACCCCACTGTACAAGCCTTGGATTACCTTCATGG 1304654
Score = 95.1 bits (104), Expect = 2e-14
Identities = 151/214 (71%), Gaps = 2/214 (1%)
Strand=Plus/Plus
Query 75934 TCCGTTGCTAGCATATGATCCATTATATGTTTCGTAAGTCCCGTCCTTTTCAGCTAGTTC 75993
||| |||||| | || || | ||| ||||| || | || | || | ||| || ||
Sbjct 1283199 TCCTTTGCTAACTGGAGAGCCCTCATAGGTTTCATATGGTCCATGCTCCTTAGCAAGGTC 1283258
Query 75994 GCAACTCGCCTCTAACGCACCGTAATAAATTGTTTCGAAAATCTTCTTATT-AAGATCTT 76052
|| || || || || || ||||||||||| ||||| || |||| |||||| || | | |
Sbjct 1283259 ACAGCTGGCTTCCAAGGCTCCGTAATAAATAGTTTCAAAGATCTGCTTATTCAATAGC-T 1283317
Query 76053 GCGCTTCAAGACTATCAAAAGGATAATGTAAAAGAATAAATGCATCTGCTAGTCCCTGAA 76112
| ||||| ||| |||||||| || | || ||||| |||||||| || || || |
Sbjct 1283318 GGGCTTCTGCACTCTCAAAAGGGTATCTCATCAGGATAAAAGCATCTGCCAGACCTTGTA 1283377
Query 76113 CTCCAATACCAATAGGTCTATGTCTCTTATTGGA 76146
| ||||| ||||| || | ||| | ||||| ||
Sbjct 1283378 CCCCAATTCCAATGGGGCGATGACGTTTATTTGA 1283411
Score = 95.1 bits (104), Expect = 2e-14
Identities = 103/137 (75%), Gaps = 0/137 (0%)
Strand=Plus/Plus
Query 76994 GTTCCTGCATTAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGATTG 77053
|| || ||||| || | || || || |||||||| ||||| | |||||||| |||||
Sbjct 1298277 GTACCAGCATTGAAGAGAGTGGGTGAAGCATGAGTAAACCACCTCTCAGAAAGAAGATTA 1298336
Query 77054 TATGTTTCAATAACTGCTTCTATATCCCATTGATGAATTCCTACAGCGACACGCATCAAC 77113
||||||||||| |||| || || || || || || || |||| || | |||||||
Sbjct 1298337 TATGTTTCAATTGCTGCATCAATGTCTTCTTTGTGGATCCCAACAGATACTCTCATCAAC 1298396
Query 77114 ATATGCTGAGGTCGTTC 77130
|||||||| |||| |||
Sbjct 1298397 ATATGCTGTGGTCTTTC 1298413
Score = 86.0 bits (94), Expect = 9e-12
Identities = 58/65 (89%), Gaps = 0/65 (0%)
Strand=Plus/Plus
Query 76520 TCAAATTCATCTCCCCAAACATCATCCAAACCAGGACATTCATTCGGACACATCAATGAC 76579
|||||||| ||||||||||| ||||||| ||||||||| ||||| ||||||||||| |||
Sbjct 1288611 TCAAATTCCTCTCCCCAAACCTCATCCAGACCAGGACACTCATTTGGACACATCAAAGAC 1288670
Query 76580 CACTC 76584
|| ||
Sbjct 1288671 CAGTC 1288675
>seq29
Length=11376298
Score = 89.7 bits (98), Expect = 7e-13
Identities = 222/332 (67%), Gaps = 15/332 (5%)
Strand=Plus/Minus
Query 44391 CTATTGGTACTATCTAGAGATTGTACTTCCTCTAGATCAGGATAATATATACGTTGATAG 44450
|| ||||| ||| | || ||| ||||| |||| || || ||| | || | || | |
Sbjct 50118 CTTTTGGTGTCATCCAAAGCTTGAACTTCTTCTATTTCTGGGTAAAAAATCCATTCACAA 50059
Query 44451 ATTAGTTGAGCTATTCTATCACCTGTATTTATTTTAAAGGTATCTTTTCCATTATTGATC 44510
| || || || |||| ||||||| | || || ||| | ||||| ||| ||| | |
Sbjct 50058 ACGAGCTGTGCAATTCGATCACCTTTTTTGGCTTCAAACTTTTCTTTGCCAAAATTAAAC 49999
Query 44511 AAAATTACTCCAATGTTCCCCCTATAATCTTCATCTATTACTCCACCTCCCACATCAATA 44570
| | || ||| || || ||||||||||||||||| || ||| ||| |||||||||
Sbjct 49998 AGTACAACACCAGCATTTCCTCTATAATCTTCATCTATGACACCAGATCCTACATCAATA 49939
Query 44571 ---CCTTTTAGAGAAAGACCCGATCTAGGCGCTATTCTTCCATAA----CAGAATTTTGG 44623
|||| || | || || | || |||| ||||| ||| ||||| ||
Sbjct 49938 AAGTGTTTTGCAGCCAAGCCAGACCATGGAGCTACTCTTCAGTAACACCCAGAA----GG 49883
Query 44624 CATAGACATACGAATATCTGTTTTAATCAACCGTCTTTCTCC--AGGAGGGATAGTATAA 44681
| | || | ||||||||||| | ||| | |||||||| ||| || || | |||
Sbjct 49882 AAGCGCTATCTGTATATCTGTTTTCA-CAAGAG-CTTTCTCCATAGGTGGTATTCTGTAA 49825
Query 44682 TCGTAAGCACTGTATAAATCATATCCTGCCGC 44713
|| || |||||||| | || || ||||| ||
Sbjct 49824 TCATAGGCACTGTACAGGTCGTAGCCTGCGGC 49793
>seq494
Length=1524325
Score = 87.8 bits (96), Expect = 3e-12
Identities = 99/132 (75%), Gaps = 3/132 (2%)
Strand=Plus/Plus
Query 46274 TTATGATTCTTTAAAAGTCGACATCTAAAGAAAAATGATTATCTTCTTG---TGACATAA 46330
||| | || |||| ||||| |||| |||| |||| ||||||| || |||||| |
Sbjct 779243 TTAAGCTTGTTTAGAAGTCAGCATCCAAAGTAAAAGAATTATCTATTTTACTTGACATCA 779302
Query 46331 CTCCCATTTTTTGGTATTCACCTACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATG 46390
|| |||| ||||| ||||||||||| | ||||| || || ||| | || ||||||| ||
Sbjct 779303 CTGCCATCTTTTGATATTCACCTACTCTCTTCTCAAAGAACTTAATCTTTCCTTCCAGTG 779362
Query 46391 ATATATTTTCCA 46402
| || || ||||
Sbjct 779363 AAATGTTCTCCA 779374
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 712870628017920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |