Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cebus_20capucinus_20imitator_20[refseq_20GCF_5F001604975.1_202016- 04-04] 7,156 sequences; 2,717,703,182 total letters Query= NC_031224.1 Length=59443 Score E Sequences producing significant alignments: (Bits) Value seq13 82.4 3e-11 >seq13 Length=13416947 Score = 82.4 bits (90), Expect = 3e-11 Identities = 108/147 (73%), Gaps = 2/147 (1%) Strand=Plus/Plus Query 52110 ATGGCGTTGGCTCCCTGCCATACACTATTCCAATTCTATGTAGCTGAA-GGTAAGCTTTC 52168 |||||| || |||| |||||| | || | ||| ||||| || | |||| ||| |||| || Sbjct 11482356 ATGGCGCTGCCTCCATGCCATGCCCTCTGCCAGTTCTACGTGG-TGAACGGTGAGCTGTC 11482414 Query 52169 GTGCCATTTGTATCAGCGGTCTGCCGACATGTTCTTGGGCGTTCCGTTTAACATTGCCAG 52228 ||||| |||| ||| | || | |||||| | | || || || || ||||||||||| Sbjct 11482415 CTGCCAGCTGTACCAGAGATCAGGAGACATGGGCCTAGGTGTGCCTTTCAACATTGCCAG 11482474 Query 52229 CTATTCCTTGCTGACGCATCTGATTGC 52255 ||| || |||| ||| | |||| || Sbjct 11482475 CTACGCCCTGCTCACGTACATGATCGC 11482501 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 190079846117160