Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cercocebus_20atys_20[refseq_20GCF_5F000955945.1_202015-03-19] 11,433 sequences; 2,848,246,356 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq2220 95.1 8e-15 >seq2220 Length=7499480 Score = 95.1 bits (104), Expect = 8e-15 Identities = 168/233 (72%), Gaps = 9/233 (4%) Strand=Plus/Plus Query 97402 TATTCTGCTCCAAAATGCCTCCATTGGAATCCATAAACAGGTCCAAGGTCTCCTTCTTCT 97461 |||||||| |||||||||||||| ||||| |||| ||| || || | ||| ||||||||| Sbjct 3702205 TATTCTGCCCCAAAATGCCTCCA-TGGAAGCCAT-AACTGGACCCAAGTC-CCTTCTTCT 3702261 Query 97462 CT-ATCACAGAAACCAAGCTTATCTAAATAGGACCTAGATCCATTTGC-ATCCCAAATGT 97519 || | |||| || || | || ||| || | ||||||||||| |||||| || | Sbjct 3702262 CTGGCCGGAGAACCCCAGGCTGTCCAAAAAGTCTCGGGATCCATTTGCAATCCCAGATTT 3702321 Query 97520 GCACACCAGATGCTGCAAGCTCTTTGCTGTCAGTAGATCCTCTGATAAACCACAACAATT 97579 ||| || | | |||||||| | || ||||| |||||||||||| ||| | Sbjct 3702322 TCACTCCCTTGGAAGACAGCTCTTTAGCATTTGTGGATCCCTTGATAAACCACAGCAACT 3702381 Query 97580 CTTCC-ACAACACCTCTCCAAAATACTCTCTTAGTTGTTAAGAGAGGAAAATC 97631 | ||| | |||||| || || || || | || |||| | | |||||||| || Sbjct 3702382 CCTCCAAAAACACC-CTTCAGAA-ACACGTTTGGTTG-TCACAGAGGAAATTC 3702431 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346735679225810