Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cercocebus_20atys_20[refseq_20GCF_5F000955945.1_202015-03-19] 11,433 sequences; 2,848,246,356 total letters Query= NC_001993.1 Length=236120 Score E Sequences producing significant alignments: (Bits) Value seq5683 98.7 1e-15 >seq5683 Length=19003911 Score = 98.7 bits (108), Expect = 1e-15 Identities = 161/232 (69%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 ||||| || ||| | ||||| || | |||||||| || || | ||| | || | | | Sbjct 4210688 ATGCAGATCTTTGTGAAGACCCTCCCGGGCAAAACCATCACCCTTGAGGTCGAGCCCAGT 4210629 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 || || ||| ||| | ||| ||||||||||| || || ||||| |||||||| || Sbjct 4210628 GACACCATTGAGAATGTCAAAGCCAAAATTCAAGACAAGGAGGGTATCCCACCTGACCAG 4210569 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 || | || || ||||| || ||||| | || ||| | || || | ||| || || Sbjct 4210568 CAGCGTCTGATATTTGCCGGCAAACAGCTGGAAGATGGCCGCACTCTCTCAGACTACAAC 4210509 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTATTA 124770 || || ||||| || || |||| |||| || || | |||||||| |||| Sbjct 4210508 ATCCAGAAAGAGTCCACCCTGCACCTGGTGTTGCGCCTGCGAGGTGGCATTA 4210457 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 755348035894400