Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cercocebus_20atys_20[refseq_20GCF_5F000955945.1_202015-03-19] 11,433 sequences; 2,848,246,356 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq4087 86.0 9e-12 >seq4087 Length=903614 Score = 86.0 bits (94), Expect = 9e-12 Identities = 207/309 (67%), Gaps = 6/309 (2%) Strand=Plus/Plus Query 124999 TTCC-CATCAGGTATCATGACATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGG 125057 |||| |||| ||| || || || ||| | ||||| || ||||| |||| ||||| ||| Sbjct 27754 TTCCTCATCGAGTACCACGATATCTGGCAGATGTATAAGAAGGCGGAGGCTTCCTTCTGG 27813 Query 125058 ACGGTCGAAGAGGTCGATCTGTCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAA 125117 || | ||| ||||| || |||||||||||| | | | ||||| | | | | || Sbjct 27814 ACCGCCGAGGAGGTGGACCTGTCCAAGGACATTCAGCACTGGGAATCCCTGAAGCCCGA- 27872 Query 125118 ACTGAGCGAGAGTTTATATCGCACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTC 125177 ||| || | ||||||| || || |||| |||||||| | |||||| || || Sbjct 27873 --GGAGAGATATTTTATATTCCATGTTCTGGCTTTCTTTGCAGCAAGCGATGGCATAGTA 27930 Query 125178 AACGACAATCTGTTGACACGATTCTCTCAAG-AGTTGACCATTCCAGAGGTGTCGTGCTT 125236 || || || || || ||||| |||| |||| | ||| |||| | || || Sbjct 27931 AATGAAAACTTGGTGGAGCGATTTAGCCAAGAAGTTCA-GATTACAGAAGCCCGCTGTTT 27989 Query 125237 TTACGGATTCCAAATCATGATTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGA 125296 || || |||||||| || || ||| | || || |||||||| | || ||||| Sbjct 27990 CTATGGCTTCCAAATTGCCATGGAAAACATACATTCTGAAATGTATAGTCTTCTTATTGA 28049 Query 125297 CATGTACAT 125305 || ||||| Sbjct 28050 CACTTACAT 28058 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 740953293377080