Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cercocebus_20atys_20[refseq_20GCF_5F000955945.1_202015-03-19] 11,433 sequences; 2,848,246,356 total letters Query= NC_006146.1 Length=171096 Score E Sequences producing significant alignments: (Bits) Value seq667 143 3e-29 >seq667 Length=10875949 Score = 143 bits (158), Expect = 3e-29 Identities = 115/139 (83%), Gaps = 0/139 (0%) Strand=Plus/Minus Query 10140 AGGGCTACCTGGGATGTCAGGCCCTGTCTGAAATGATCCAGTTTTACCTGGAGGAAGTAA 10199 |||| |||||||| || || ||| ||||||| ||||||||||||||||||||||| || | Sbjct 10101628 AGGGTTACCTGGGTTGCCAAGCCTTGTCTGAGATGATCCAGTTTTACCTGGAGGAGGTGA 10101569 Query 10200 TGCCACAGGCTGAAAATCAGGACCCCCACGCCAAAGAGCACGTGAACTCTCTGGGCGAGA 10259 |||| || ||||| || || ||||| || ||| ||||| |||||||| ||||| |||| Sbjct 10101568 TGCCCCAAGCTGAGAACCACGACCCAGACATCAAGGAGCATGTGAACTCCCTGGGGGAGA 10101509 Query 10260 ATCTAAAGACCCTAAGGCT 10278 |||| ||||| || ||||| Sbjct 10101508 ATCTGAAGACGCTCAGGCT 10101490 Score = 100 bits (110), Expect = 3e-16 Identities = 73/85 (86%), Gaps = 0/85 (0%) Strand=Plus/Minus Query 10359 AGCTGCAGGAAAAAGGAGTCTACAAAGCCATGAGTGAATTTGACATTTTTATTAACTATA 10418 |||| || || ||||| |||||||||||||||||||| |||||||| || || ||||| | Sbjct 10099243 AGCTCCAAGAGAAAGGCGTCTACAAAGCCATGAGTGAGTTTGACATCTTCATCAACTACA 10099184 Query 10419 TAGAAGCATACATGACCATGAAAAT 10443 ||||||| |||||||| ||||| || Sbjct 10099183 TAGAAGCCTACATGACAATGAAGAT 10099159 Score = 82.4 bits (90), Expect = 8e-11 Identities = 56/63 (89%), Gaps = 0/63 (0%) Strand=Plus/Minus Query 10301 TTTCTCCCGTGTGAAAACAAGAGCAAGGCTGTGGAGCAGGTCAAGAATGCCTTCAGCAAG 10360 ||||| || |||||||||||||||||||| ||||||||||| ||||||||||| || ||| Sbjct 10100414 TTTCTTCCCTGTGAAAACAAGAGCAAGGCCGTGGAGCAGGTGAAGAATGCCTTTAGTAAG 10100355 Query 10361 CTG 10363 || Sbjct 10100354 GTG 10100352 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547300972670080