Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cercocebus_20atys_20[refseq_20GCF_5F000955945.1_202015-03-19] 11,433 sequences; 2,848,246,356 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq6459 96.9 9e-15 seq1989 86.0 2e-11 >seq6459 Length=15015882 Score = 96.9 bits (106), Expect = 9e-15 Identities = 113/153 (74%), Gaps = 0/153 (0%) Strand=Plus/Plus Query 364111 GCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACACCCTATATG 364170 || ||| |||| |||| ||||||||| || || || | || ||||| || || |||||| Sbjct 12316690 GCTCAGCAGCTTTGGTATGCCATCATTGAGTCTCAAACAGAAACAGGCACCCCGTATATG 12316749 Query 364171 TTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACAATTCAGCAG 364230 | ||||||||||| || || || ||| |||||||||| |||| || || || | Sbjct 12316750 CTCTACAAAGATTCTTGTAATCGAAAGAGCAACCAGCAGAACCTGGGAACCATCAAATGC 12316809 Query 364231 AGCAACCTATGTACCGAGATTATTGAATACACC 364263 |||||||| || || || || | || |||||| Sbjct 12316810 AGCAACCTGTGCACAGAAATAGTGGAGTACACC 12316842 >seq1989 Length=5200062 Score = 86.0 bits (94), Expect = 2e-11 Identities = 149/213 (70%), Gaps = 8/213 (4%) Strand=Plus/Plus Query 22435 AAGAATAAGGCAGATTGGGCGCTGAAATGGAT---GAACAATGAACGTTCATTCGCGGAA 22491 ||||| |||||||||||| || | ||||| | |||| | | | | | | |||| Sbjct 4401368 AAGAAGGCGGCAGATTGGGCCTTGCACTGGATTGGGGACAAAGCAGCTACCTATGGGGAA 4401427 Query 22492 CGTCTTATTGCATTTGCTGTGGTTGAAGGCATTTTCTTTTCTGGAGCATTTTGTG-CAAT 22550 ||| || | | ||||||| | |||||||| ||||||||| |||||| | || Sbjct 4401428 CGTGTTGTAGTCTTTGCTGCAGCGGAAGGCAT---CTTTTCTGGTT-ATTTTGCATCGAT 4401483 Query 22551 CTTTTGGCTaaaaaaaCGTGCAATTATGCCGGGTCTAACGTTTTCAAATGAGTTAATTAG 22610 || ||||| || ||||| | | | ||||| || || || ||||| ||||| | ||||| Sbjct 4401484 ATTCTGGCTCAAGAAACGAGGACTGATGCCTGGCCTCACCTTTTCCAATGAACTTATTAG 4401543 Query 22611 CCGAGATGAGGGTCTTCATACCGATTTTGCGTG 22643 ||||||||||| | || |||||||| || Sbjct 4401544 TGGAGATGAGGGTTTACACTGTGATTTTGCTTG 4401576 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303162677840606