Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cercocebus_20atys_20[refseq_20GCF_5F000955945.1_202015-03-19] 11,433 sequences; 2,848,246,356 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq5683 107 2e-18 >seq5683 Length=19003911 Score = 107 bits (118), Expect = 2e-18 Identities = 154/214 (72%), Gaps = 6/214 (3%) Strand=Plus/Minus Query 24991 ACGGAACAATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGG 25050 ||| || ||||| || ||||| ||||| | | || ||| ||||||| | || || | Sbjct 4210696 ACGCAAACATGCAGATCTTTGTGAAGACCCTCCCGGGCAAAACCATCACCCTTGAGGTCG 4210637 Query 25051 AGTCGTCTGACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTC 25107 || | |||||| || ||| | || |||| |||| ||| ||||| || || || | Sbjct 4210636 AGCCCAGTGACACCATTGAG--AATGTCAAAGCCAAAATTCAA-GACAAGGAGGGTATCC 4210580 Query 25108 CACCTGACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGG 25167 |||||||||| ||||| | || |||||||||||||| | ||||||| |||||| | Sbjct 4210579 CACCTGACCAGCAGCGTCTGATATTTGCCGGCAAACAGCTGGAAGATGGCCGCACTCTCT 4210520 Query 25168 GCGATTACAATATTCAAAAAGAATCCACGCTACA 25201 || ||||| || || ||||| ||||| || || Sbjct 4210519 CAGACTACAACATCCAGAAAGAGTCCACCCTGCA 4210486 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433267620211895