Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cercocebus_20atys_20[refseq_20GCF_5F000955945.1_202015-03-19] 11,433 sequences; 2,848,246,356 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq10880 84.2 4e-11 seq1678 84.2 4e-11 >seq10880 Length=11791330 Score = 84.2 bits (92), Expect = 4e-11 Identities = 95/125 (76%), Gaps = 2/125 (2%) Strand=Plus/Minus Query 42706 TGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCT 42765 |||| |||||| | || || || || || |||||||| || | || || | || |||| Sbjct 10272846 TGGTGGCCTTTGCTGCTGTAGAAGGAATTTTCTTCTCAGGATCTTTTGCTGCTATATTCT 10272787 Query 42766 GGCTCAAGCAGA-AGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGG 42824 |||| ||| ||| |||| | ||||| |||||||| || || || |||||||||||||| Sbjct 10272786 GGCTAAAGAAGAGAGGTCTT-ATGCCAGGACTCACTTTTTCCAATGAACTCATCAGCAGA 10272728 Query 42825 GACGA 42829 || || Sbjct 10272727 GATGA 10272723 >seq1678 Length=10304083 Score = 84.2 bits (92), Expect = 4e-11 Identities = 95/125 (76%), Gaps = 2/125 (2%) Strand=Plus/Minus Query 42708 GTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGG 42767 ||||||||| | || || || ||||||||||| || || | || || || || |||||| Sbjct 209322 GTAGCCTTTGCTGCAGTGGAAGGCATCTTCTTTTCCGGTTCTTTTGCATCGATATTCTGG 209263 Query 42768 CTCAAG-CAGAAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGA 42826 |||||| | ||| | |||||| || ||||| || || || ||||| |||||||| || Sbjct 209262 CTCAAGAAACGAGGACT-GATGCCTGGCCTCACATTTTCCAATGAACTTATCAGCAGAGA 209204 Query 42827 CGAGG 42831 |||| Sbjct 209203 TGAGG 209199 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944204242124080