Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cercocebus_20atys_20[refseq_20GCF_5F000955945.1_202015-03-19] 11,433 sequences; 2,848,246,356 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq9111 93.3 4e-14 >seq9111 Length=11462142 Score = 93.3 bits (102), Expect = 4e-14 Identities = 111/151 (74%), Gaps = 0/151 (0%) Strand=Plus/Minus Query 20249 TGAGCAAGCATATAAGTTAAGAGGGAATAGCTGGCAATGTTAAAAGGAACTCCCAAACCC 20308 || |||| ||| || || | |||| |||||||| ||||| ||||| || || | ||| Sbjct 5684290 TGCGCAATCATGTATGTGAGCAGGGCGTAGCTGGCGATGTTGAAAGGCACACCTAGGCCC 5684231 Query 20309 ATGTCTCCCGACCTCTGATACAGCTGACAGGAAAGCTCACCGTCAGCTACATAAAATTGA 20368 |||||||| || ||||| |||||||| ||||| ||||||| || | ||||| || || Sbjct 5684230 ATGTCTCCTGATCTCTGGTACAGCTGGCAGGACAGCTCACTGTTCACCACATAGAACTGG 5684171 Query 20369 CATAACAAGTGACAGGGCGGAAGCGCCATCA 20399 || | || || || || || ||||||| Sbjct 5684170 CAGAGGGCATGGCATGGAGGCAGTGCCATCA 5684140 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 441309722309720