Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cercocebus_20atys_20[refseq_20GCF_5F000955945.1_202015-03-19] 11,433 sequences; 2,848,246,356 total letters Query= NC_016447.1 Length=219474 Score E Sequences producing significant alignments: (Bits) Value seq1856 102 1e-16 >seq1856 Length=4242354 Score = 102 bits (112), Expect = 1e-16 Identities = 175/251 (70%), Gaps = 5/251 (2%) Strand=Plus/Minus Query 197398 CCGCTAAATATCTCAAACGCGACAGATATTGAGAACGTGGCTTGGAACGGCCCTAAAATC 197457 || ||||| |||||| | |||| |||||| | || |||| || || |||| Sbjct 2856062 CCCCTAAACATCTCAGTAGACACAGCGATTGAGCATGTCATCTGGATTGGTCCCAAAAAG 2856003 Query 197458 GCTTTAGCATTTGCCAATCCTAAAGAC---GTTACCATAATGGATAAAAGCTACCAGGGT 197514 ||| | || ||||| ||| ||||| || ||| | |||| |||||||||||||| Sbjct 2856002 GCTCTTGCTTTTGCACGTCCCAAAGAAAATGTAACCTTTATGGCCAAAAGCTACCAGGGC 2855943 Query 197515 CGTGTCAACATTAGCCA-AACCAACTACTCTTTGTGCATTAGGAACCTGACCGTGAATGA 197573 | | |||| | |||| | ||||| ||| ||| || || ||||| ||||||| Sbjct 2855942 CAACTAAACA-TCGCCAGGGGGAGTTACTCCCTGTCCATCAGCAATCTGACTCTGAATGA 2855884 Query 197574 TGCTGGTTCGTATAAGGCCCAAATTAACAAAAATAATTCCCAAGTCACCACCAAGGAGGA 197633 ||| || || || || ||||| || ||| ||| |||| |||||||||| ||||||| Sbjct 2855883 TGCAGGATCCTACAAAGCCCAGATAAACCAAAGGAATTTTGAAGTCACCACTGAGGAGGA 2855824 Query 197634 ATTTACTCTGT 197644 ||| || |||| Sbjct 2855823 ATTCACCCTGT 2855813 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 702088448443120