Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cercocebus_20atys_20[refseq_20GCF_5F000955945.1_202015-03-19] 11,433 sequences; 2,848,246,356 total letters Query= NC_017979.1 Length=43376 Score E Sequences producing significant alignments: (Bits) Value seq7011 102 2e-17 >seq7011 Length=47169369 Score = 102 bits (112), Expect = 2e-17 Identities = 181/263 (69%), Gaps = 6/263 (2%) Strand=Plus/Plus Query 965 TGGATGTTATGGTAGAATAGCTCCTAGGTCCGGATTAGCGGCTAAGTTTATGATTGATGT 1024 ||| |||||||| ||| ||||||| |||| || || || || || | |||||||| Sbjct 6213518 TGGGTGTTATGGAAGAGTAGCTCCACGGTCAGGCTTGGCTGCAAAACACTTTATTGATGT 6213577 Query 1025 GGGTGCTGGTGTTATTGATCCAGACTTTAGGGGGAACGTTGGTGTTGTTTTATTTAATTT 1084 || |||||||| || ||| ||| | ||| || || ||||||||||| | |||||||| Sbjct 6213578 AGGAGCTGGTGTCATAGATGAAGATTATAGAGGAAATGTTGGTGTTGTACTGTTTAATTT 6213637 Query 1085 TAGC---GATAAGCGTTTTCATATTTCAAGAGGTGATAGGATTGCTCAGTTAATTTGTGA 1141 | || || ||| ||| | | || |||||| | ||||| ||| | ||||| || Sbjct 6213638 TGGCAAAGAAAAG---TTTGAAGTCAAAAACGGTGATCGAATTGCACAGCTCATTTGCGA 6213694 Query 1142 AAAGGCTGTTTTTCCATCCATTCAAATAGTGGATTCCTTAGAGGATTCGGAAAGGGGTTC 1201 | | | ||| |||| || || ||| | | || || || | ||||||||||| Sbjct 6213695 ACGGATTTTTTATCCAGAAATAGAAGAAGTTCAAGCTTTGGATGACACCGAAAGGGGTTC 6213754 Query 1202 TGCAGGATTTGGGTCTACCGGAA 1224 | || ||||| || || |||| Sbjct 6213755 AGGTGGTTTTGGTTCCACTGGAA 6213777 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 138662771632548