Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cercocebus_20atys_20[refseq_20GCF_5F000955945.1_202015-03-19] 11,433 sequences; 2,848,246,356 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq1989 105 1e-17 seq1678 93.3 8e-14 >seq1989 Length=5200062 Score = 105 bits (116), Expect = 1e-17 Identities = 377/574 (66%), Gaps = 29/574 (5%) Strand=Plus/Plus Query 25474 GATATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGAT 25533 ||||| ||| ||||||| |||||||| || || ||||||||| || ||| | || Sbjct 4401023 GATATCTGGCAGATGTATAAGAAGGCGGAAGCTTCCTTCTGGACCGCGGAGGAGGTGGAC 4401082 Query 25534 CTGGCCAAGGACATGGACGGCTGGTACGCTCT--ATCCAAAGACGAGCAGCATTTTCTCA 25591 ||| |||||||||| |||| | | || | || || ||| || ||||| | Sbjct 4401083 CTGTCCAAGGACATTTGGCACTGGGAATCCCTGAAGCCCGAGGAGAG-AG-ATTTTATAT 4401140 Query 25592 AGTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGA 25651 | || ||| ||||||| ||| |||||| ||||| || | || || ||| Sbjct 4401141 CCCATGTTCTGGTTTTCTTTGTAGCAAGTGATGGCATAGTAAATGCAAACTTGGTGGAGC 4401200 Query 25652 GATTCACCAGGGAAGTGCAGTACGTG---GAGGCCAAGTGTTTCTACGGTTTCCAGATGG 25708 ||| | | ||||| ||| ||| || ||| ||||||| || ||||| || | Sbjct 4401201 GATGTAGCCAAGAAGTTCAG---GTGACAGAAGCCCGCTGTTTCTGTGGCTTCCAAATTG 4401257 Query 25709 CCATCGAAAATGTGCACTCTGAGGTGTATGCCAAGCTTC--TGATGACG--TACATTACA 25764 |||| ||||| | || |||| ||||| || ||| | |||| ||||| | | Sbjct 4401258 CCATGGAAAACATACATTCTGGAATGTAT----AGTTTCCTTATTGACACTTACATAAAA 4401313 Query 25765 GACGTCGCCGAG--AGAGATCGGCTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGA 25822 || || | || || || | || |||||| || || || | |||||| Sbjct 4401314 GA--TCCCAAAGTAAGGGAATTTCGCTTCAATGCCATTGAAACGATGCCTTGTGTCAAGA 4401371 Query 25823 GGAAGGCGCGGTGGGCCATGAAGTGGATCAACAGCCAGAGC-GCTACGTTTGGCGAGCGG 25881 | ||| |||||| || | ||||| | || ||| ||||| | ||| || || Sbjct 4401372 AGGCGGCAGATTGGGCCTTGCACTGGATTGGG-GACAAAGCAGCTACCTATGGGGAACGT 4401430 Query 25882 CTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTC 25941 | |||| ||||||||| | ||| |||||||||| |||| ||||| | || ||| Sbjct 4401431 GTTGTAGTCTTTGCTGCAGCGGAAGGCATCTTTTCT---GGTTATTTTGCATCGATATTC 4401487 Query 25942 TGGCTCAAGCAGAAGGGGAC-CATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAG 26000 ||||||||| | | | |||| ||||| || || ||||||||| || || || || | Sbjct 4401488 TGGCTCAAG-AAACGAGGACTGATGCCTGGCCTCACCTTTTCCAATGAACTTATTAGTGG 4401546 Query 26001 GGACGAGGGTCTCCACAGAGATTTTGCCTGCCTG 26034 || |||||| | ||| | |||||||| |||||| Sbjct 4401547 AGATGAGGGTTTACACTGTGATTTTGCTTGCCTG 4401580 >seq1678 Length=10304083 Score = 93.3 bits (102), Expect = 8e-14 Identities = 97/125 (78%), Gaps = 2/125 (2%) Strand=Plus/Minus Query 25885 GTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGG 25944 |||||||||||||| ||||| |||||||| || |||||| ||||| | || |||||| Sbjct 209322 GTAGCCTTTGCTGCAGTGGAAGGCATCTTCTTTTCCGGTTCTTTTGCATCGATATTCTGG 209263 Query 25945 CTCAAGCAGAAGGGGAC-CATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGA 26003 |||||| | | | |||| ||||| || || |||||||| || || |||||||| || Sbjct 209262 CTCAAG-AAACGAGGACTGATGCCTGGCCTCACATTTTCCAATGAACTTATCAGCAGAGA 209204 Query 26004 CGAGG 26008 |||| Sbjct 209203 TGAGG 209199 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928712056467520