Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cercocebus_20atys_20[refseq_20GCF_5F000955945.1_202015-03-19] 11,433 sequences; 2,848,246,356 total letters Query= NC_021247.1 Length=228750 Score E Sequences producing significant alignments: (Bits) Value seq4087 93.3 6e-14 >seq4087 Length=903614 Score = 93.3 bits (102), Expect = 6e-14 Identities = 134/186 (72%), Gaps = 6/186 (3%) Strand=Plus/Minus Query 18411 TTTCTTTGGAATCTTTTATATAAGTGTCGATTAACAAAGAATACATTTCAGAATGTATGC 18470 ||||||||| ||||||||| |||||||| || | | | ||||||||||||||||||| Sbjct 28075 TTTCTTTGGGATCTTTTATGTAAGTGTCAATAAGAAGACTATACATTTCAGAATGTATGT 28016 Query 18471 TTTCCATAGCTATCTGAAAACTATAAAACGATCTAGCCTCGGGATATTGAA--TC-TCGC 18527 ||||||| || || || || | ||| || | | || || | | |||| || | || Sbjct 28015 TTTCCATGGCAATTTGGAAGCCATAGAAACAGCGGGCTTCTGTAATCTGAACTTCTTGGC 27956 Query 18528 TATAAAATCTTTCTACCAAATTCTCATTAACTATACCGTCAGCAGATGCGAAAAATGCCA 18587 | ||||| || ||||| || ||||| ||||| || || | ||| || || |||| Sbjct 27955 T---AAATCGCTCCACCAAGTTTTCATTTACTATGCCATCGCTTGCTGCAAAGAAAGCCA 27899 Query 18588 AAACAT 18593 ||||| Sbjct 27898 GAACAT 27893 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 731767406342800