Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cercocebus_20atys_20[refseq_20GCF_5F000955945.1_202015-03-19] 11,433 sequences; 2,848,246,356 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq4087 104 7e-17 >seq4087 Length=903614 Score = 104 bits (114), Expect = 7e-17 Identities = 222/327 (68%), Gaps = 6/327 (2%) Strand=Plus/Plus Query 133076 TTTGTTATGTTCCCAATTAAGGACGACGAGATTTGGCAGATGTATAAAAAACAGCAAGAT 133135 ||||| || |||| || || || |||| || |||||||||||||| || | | | | Sbjct 27745 TTTGTCATCTTCCTCATCGAGTACCACGATATCTGGCAGATGTATAAGAAGGCGGAGGCT 27804 Query 133136 TTATTTTGGACTTCAACTGAAGTAGATTTATCCAAAGAC--CCAGCCCACTGGGAAGCCC 133193 | || ||||| | || || || | ||||| ||| ||| ||||||||| ||| Sbjct 27805 TCCTTCTGGACCGCCGAGGAGGTGGACCTGTCCAAGGACATTCAG--CACTGGGAATCCC 27862 Query 133194 TTACTGGGGATGAAAAACATTTTAT-TTCTATGATTTTAGCGTTTTTTGCTGCGAGTGAT 133252 | | || || | | ||||||| ||| ||| || | || || ||||| || || ||| Sbjct 27863 TGAAGCCCGAGGAGAGATATTTTATATTCCATG-TTCTGGCTTTCTTTGCAGCAAGCGAT 27921 Query 133253 GGTATTGTTCTTGAAAATTTAGGAACACGGTTTATGGGAGAAGTTCAACTGGCCGAAGCC 133312 || || || |||||| || | || |||| ||||||||| | | |||||| Sbjct 27922 GGCATAGTAAATGAAAACTTGGTGGAGCGATTTAGCCAAGAAGTTCAGATTACAGAAGCC 27981 Query 133313 CGTGCCTTTTATGGGCTACAGATTGCGATGGAAAATATCCATTCTATCACATATTCTACT 133372 || || ||||| | || ||||| |||||||| || |||||| | ||| | | Sbjct 27982 CGCTGTTTCTATGGCTTCCAAATTGCCATGGAAAACATACATTCTGAAATGTATAGTCTT 28041 Query 133373 CTAATTGATACTTACATCAAAGATACC 133399 || ||||| |||||||| |||||| || Sbjct 28042 CTTATTGACACTTACATAAAAGATCCC 28068 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471602000338921