Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cercocebus_20atys_20[refseq_20GCF_5F000955945.1_202015-03-19] 11,433 sequences; 2,848,246,356 total letters Query= NC_024447.1 Length=282356 Score E Sequences producing significant alignments: (Bits) Value seq1723 100 5e-16 >seq1723 Length=9765217 Score = 100 bits (110), Expect = 5e-16 Identities = 115/155 (74%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 58385 TGGTGGTACTATATATCTAAAGGGATAGAATACTTAGATACAGTGTTTTTCATACTTAGG 58444 |||||||||| | | |||||||| | || || || || ||||||||||| || || || Sbjct 5573766 TGGTGGTACTTTGTTTCTAAAGGAGTTGAGTATTTGGACACAGTGTTTTTTATTCTGAGA 5573707 Query 58445 AAAAAGTTTAATCATGTTAGCTTTCTACACGTATATCATCATTTTACTATGTTTACTTTA 58504 || || || || ||| || || || || |||||||| | ||| ||||||||||| Sbjct 5573706 AAGAAAAACAACCAGGTTTCTTTCCTTCATGTGTATCATCACTGTACGATGTTTACTTTG 5573647 Query 58505 GGATGGGTAGGTATTAAATGGTTTGCAGGAGGTCA 58539 | ||| | || ||||| ||| |||||||||| || Sbjct 5573646 TGGTGGATTGGAATTAAGTGGGTTGCAGGAGGACA 5573612 Score = 84.2 bits (92), Expect = 4e-11 Identities = 97/131 (74%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 58541 GCATTTTTCGGCGCTCAGTTGAATTCTTTTATCCATGTTATTATGTATAGTTATTATGGT 58600 |||||||| || || ||| ||||||| ||||||||||| |||||||| || ||||| Sbjct 5571504 GCATTTTTTGGAGCCCAGATGAATTCCTTTATCCATGTGATTATGTACTCATACTATGGG 5571445 Query 58601 ATGGCGGCGTGTGGACATATGTTTAAAAAGTATTTATGGTGGAAGCGTTACCTTACTATA 58660 | || || | ||| | | || | || ||| | |||||||| || ||||| ||||| Sbjct 5571444 TTAGCTGCATTTGGCCCATGGATTCAGAAATATCTTTGGTGGAAACGATACCTGACTATG 5571385 Query 58661 ATGCAATTGGT 58671 ||||| |||| Sbjct 5571384 TTGCAACTGGT 5571374 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 903282091246880