Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cercocebus_20atys_20[refseq_20GCF_5F000955945.1_202015-03-19] 11,433 sequences; 2,848,246,356 total letters Query= NC_026141.2 Length=4988 Score E Sequences producing significant alignments: (Bits) Value seq2353 109 2e-20 seq4692 98.7 3e-17 seq3558 98.7 3e-17 seq2153 98.7 3e-17 seq2044 98.7 3e-17 seq1723 84.2 7e-13 >seq2353 Length=2157725 Score = 109 bits (120), Expect = 2e-20 Identities = 68/73 (93%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 2768 GGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAAC 2827 ||| ||| |||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 375658 GGCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCAAT 375717 Query 2828 CCCGGGCTTCAGC 2840 |||||| |||||| Sbjct 375718 CCCGGGTTTCAGC 375730 Score = 104 bits (114), Expect = 7e-19 Identities = 66/72 (92%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||||| | Sbjct 362269 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCAATC 362328 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 362329 CCGGGTTTCGGC 362340 Score = 104 bits (114), Expect = 7e-19 Identities = 66/72 (92%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||||| | Sbjct 396789 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCAATC 396848 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 396849 CCGGGTTTCGGC 396860 Score = 102 bits (112), Expect = 3e-18 Identities = 62/66 (94%), Gaps = 0/66 (0%) Strand=Plus/Plus Query 2775 GTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCCGGGC 2834 ||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| Sbjct 397294 GTAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCAATCCCGGGT 397353 Query 2835 TTCAGC 2840 ||| || Sbjct 397354 TTCGGC 397359 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 206879 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 206938 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 206939 CCGGGTTTCGGC 206950 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 414207 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 414148 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 414147 CCGGGTTTCGGC 414136 Score = 89.7 bits (98), Expect = 2e-14 Identities = 66/75 (88%), Gaps = 3/75 (4%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGA--AGATCT-AAAGGTCCCTGGTTCA 2825 |||||| ||||||| |||||||||| ||||||||| ||| || |||||||| ||||||| Sbjct 414902 GCTGAAATAGCTCAATTGGGAGAGCGTTAGACTGACCAGACCTTAAAGGTCCGTGGTTCA 414961 Query 2826 ACCCCGGGCTTCAGC 2840 |||||||| |||||| Sbjct 414962 ACCCCGGGTTTCAGC 414976 Score = 86.0 bits (94), Expect = 2e-13 Identities = 64/75 (85%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 2766 ATGGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCA 2825 |||| |||| |||||||||||||||||| |||||||||| ||||| || |||||||| Sbjct 1471950 ATGGTTGAAATAGCTCAGTTGGGAGAGCTTTAGACTGAATATCTACGGGCTTCTGGTTCA 1471891 Query 2826 ACCCCGGGCTTCAGC 2840 | |||||| |||||| Sbjct 1471890 ATCCCGGGTTTCAGC 1471876 >seq4692 Length=25524837 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 11999472 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 11999531 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 11999532 CCGGGTTTCGGC 11999543 >seq3558 Length=2942895 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 123212 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 123271 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 123272 CCGGGTTTCGGC 123283 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 132114 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 132173 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 132174 CCGGGTTTCGGC 132185 >seq2153 Length=7056042 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 1153349 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 1153290 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 1153289 CCGGGTTTCGGC 1153278 >seq2044 Length=20526591 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 13301283 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 13301224 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 13301223 CCGGGTTTCGGC 13301212 >seq1723 Length=9765217 Score = 84.2 bits (92), Expect = 7e-13 Identities = 57/64 (89%), Gaps = 0/64 (0%) Strand=Plus/Minus Query 2773 AAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCCGG 2832 || |||||||||||||||||| ||||||||||||||||||||||||||||| | || || Sbjct 4595775 AAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTTGATCCTGG 4595716 Query 2833 GCTT 2836 | || Sbjct 4595715 GTTT 4595712 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15847618032285