Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cercocebus_20atys_20[refseq_20GCF_5F000955945.1_202015-03-19] 11,433 sequences; 2,848,246,356 total letters Query= NC_027016.1 Length=226084 Score E Sequences producing significant alignments: (Bits) Value seq998 107 3e-18 >seq998 Length=12558390 Score = 107 bits (118), Expect = 3e-18 Identities = 103/132 (78%), Gaps = 0/132 (0%) Strand=Plus/Plus Query 214092 TGGGTAACGAGATGTTTGGACTCGTGCCCGGTTTCATGGTGTACGCCATTATCTGGCTGA 214151 |||| | ||| | ||||| || ||||| ||| | ||| |||| |||| ||||||||| Sbjct 2147247 TGGGGCAGGAGGTCTTTGGTCTGGTGCCTGGTCTGATGATGTATGCCACAATCTGGCTGC 2147306 Query 214152 GAGAGCACAACAGGGTTTGCGACGTGCTGAAACAAGAGCACCCGGAATGGAACGACGAAC 214211 | || |||||||| || ||||||||||| ||||| ||||| || |||||| || || | Sbjct 2147307 GGGAACACAACAGAGTGTGCGACGTGCTTAAACAGGAGCATCCAGAATGGGGTGATGAGC 2147366 Query 214212 AGCTGTTCCAGA 214223 || ||||||||| Sbjct 2147367 AGTTGTTCCAGA 2147378 Score = 87.8 bits (96), Expect = 3e-12 Identities = 197/296 (67%), Gaps = 0/296 (0%) Strand=Plus/Plus Query 214605 AAGGAGATAGCTGTCGAGCTGGAGGCCTTCTACGGTGATATCGAAGCCGTCGAACTCTAC 214664 ||||| || ||| ||| |||| || |||| ||||| ||||| || || || || || Sbjct 2149139 AAGGAAATGTCTGCAGAGTTGGAAGCACTCTATGGTGACATCGATGCTGTGGAGCTGTAT 2149198 Query 214665 GCTGATTTCCTCGCTGAAAAACCGTGTCCCGATGCCATCCTCGGTGACGGCGTCCTCGAG 214724 ||| | || | ||||| || |||| ||||||||| | ||||| | | | || Sbjct 2149199 CCTGCCCTTCTGGTAGAAAAGCCTCGTCCAGATGCCATCTTTGGTGAGACCATGGTAGAA 2149258 Query 214725 TCGGGGGCTCCGTTCTCCCTGAGGGGACTCGCGGCGAACGTCATCTGCTCCCCGGGCTAC 214784 || || ||||||||| ||| ||||| || || || || || || || | |||| Sbjct 2149259 GTTGGAGCACCGTTCTCCTTGAAAGGACTTATGGGTAATGTTATATGTTCTCCTGCCTAC 2149318 Query 214785 TGGAAACGCAACACACTCGGTAGCTCCGCGAGTTTCAACATCGTGAGGAGCGCGACCCTT 214844 ||||| | | ||| | ||| | | | |||| | ||| | | | || | || Sbjct 2149319 TGGAAGCCAAGCACTTTTGGTGGAGAAGTGGGTTTTCAAATCATCAACACTGCCTCAATT 2149378 Query 214845 CAGTCTCTCATCTGTAGCAACGTCAAGGGATGTCCGTTAGCCGCATTCCGAGCTCC 214900 |||||||||||||| | ||||| ||||| ||||| || | ||||| | | ||| Sbjct 2149379 CAGTCTCTCATCTGCAATAACGTGAAGGGCTGTCCCTTTACTTCATTCAGTGTTCC 2149434 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 723237425557920