Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cercocebus_20atys_20[refseq_20GCF_5F000955945.1_202015-03-19] 11,433 sequences; 2,848,246,356 total letters Query= NC_028238.1 Length=188534 Score E Sequences producing significant alignments: (Bits) Value seq7011 95.1 1e-14 seq1723 89.7 6e-13 >seq7011 Length=47169369 Score = 95.1 bits (104), Expect = 1e-14 Identities = 235/357 (66%), Gaps = 15/357 (4%) Strand=Plus/Minus Query 22580 GGATCCAAAACCA---GAACCCCCTCTTTCTGTGATACTCAATTCTTCCACAGTCTTTAC 22636 ||| ||||||||| ||||||| |||| ||| || |||| || | || Sbjct 6213770 GGAACCAAAACCACCTGAACCCC---TTTCGGTG---------TCATCCAAAGCTTGAAC 6213723 Query 22637 TTCTCTTATTTCTGGATGCGCTATTTTTTCAAATATAAGTTGTGCTACTCTATCGCCCTT 22696 |||| ||||||||||| || ||| | || || ||||| | || ||| || || Sbjct 6213722 TTCTTCTATTTCTGGATAAAAAATCCGTTCGCAAATGAGCTGTGCAATTCGATCACCGTT 6213663 Query 22697 ATTTACGTAAAATACATCCTTACTAAAATTAAATAACAATATACCTATATTTCCCCTGTA 22756 || || | ||| || || | ||||||||| | | | ||| | |||||| || || Sbjct 6213662 TTTGACTTCAAACTTTTCTTTGCCAAAATTAAACAGTACAACACCAACATTTCCTCTATA 6213603 Query 22757 ATCTCTATCTATCACACCCGCGCCTACATCGATAAAATGATTACATGCCAATCCCGATCT 22816 |||| |||||| ||||| || |||||||| ||||| || || ||||| || || | Sbjct 6213602 ATCTTCATCTATGACACCAGCTCCTACATCAATAAAGTGTTTTGCAGCCAAGCCTGACCG 6213543 Query 22817 AGGAGATATTCTTCCATATAATCCTTCCGGTATATCTATTATAATATCAGTCATTACTAA 22876 |||| || ||||||||| | || || | |||| ||| || || | || | Sbjct 6213542 TGGAGCTACTCTTCCATAACACCCAGAAGGGAGCGCTATCTGAATGTCCGTTTTCACAAG 6213483 Query 22877 TTGTTTACCCATAGGTTCTATTACGTAATTATACGCGCTATATAGATCATATCCTGC 22933 ||| |||||||| |||| ||||| ||| || || || || || || || || Sbjct 6213482 AGCTTTCTCCATAGGTGGTATTGTGTAATCATAGGCACTGTACAGGTCGTAGCCCGC 6213426 >seq1723 Length=9765217 Score = 89.7 bits (98), Expect = 6e-13 Identities = 114/157 (73%), Gaps = 0/157 (0%) Strand=Plus/Minus Query 32674 TGTGGTTATATTTTATCTCTAAAGGTATAGAATATCTAGATACTATTTTCTTCATAATGA 32733 |||||| || ||| | |||||||| | || ||| | || || | || || || ||| Sbjct 5573768 TGTGGTGGTACTTTGTTTCTAAAGGAGTTGAGTATTTGGACACAGTGTTTTTTATTCTGA 5573709 Query 32734 GAAAGAAATTTAACCAAGTTAGCTTTTTGCACGTATACCACCATTTTACCATGTTTACTT 32793 |||||||| ||||| ||| || | || || || || || | ||| |||||||||| Sbjct 5573708 GAAAGAAAAACAACCAGGTTTCTTTCCTTCATGTGTATCATCACTGTACGATGTTTACTT 5573649 Query 32794 TAGGATGGATAGGGATTAAATGGTTTGCAGGAGGACA 32830 | | ||||| || ||||| ||| ||||||||||||| Sbjct 5573648 TGTGGTGGATTGGAATTAAGTGGGTTGCAGGAGGACA 5573612 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 603094597923920