Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cercocebus_20atys_20[refseq_20GCF_5F000955945.1_202015-03-19] 11,433 sequences; 2,848,246,356 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq9111 156 4e-33 >seq9111 Length=11462142 Score = 156 bits (172), Expect = 4e-33 Identities = 131/161 (81%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 34565 GATCTCCCTCTGATGGCGCTCCCCCCGTGCCACACCCTCTGCCAATTCTACGTCGCGAAT 34624 ||||| ||||||||||| || || || ||||| |||||||||| ||||| || | ||| Sbjct 5684130 GATCTTCCTCTGATGGCACTGCCTCCATGCCATGCCCTCTGCCAGTTCTATGTGGTGAAC 5684189 Query 34625 GGGGAGCTGTCCTGCCAGCTCTATCAACGATCGGGAGACATGGGGTTAGGGGTGCCGTTC 34684 | ||||||||||||||||| || || |||| ||||||||||| |||| ||||| ||| Sbjct 5684190 AGTGAGCTGTCCTGCCAGCTGTACCAGAGATCAGGAGACATGGGCCTAGGTGTGCCTTTC 5684249 Query 34685 AACATTGCTAGTTACGCTCTGCTCACGTACATGATCGCTCA 34725 ||||| || || ||||| |||||||| |||||||| || || Sbjct 5684250 AACATCGCCAGCTACGCCCTGCTCACATACATGATTGCGCA 5684290 Score = 156 bits (172), Expect = 4e-33 Identities = 131/161 (81%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 6620 TGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCTAACCCC 6679 || || |||||||| |||||||| ||||| || || |||||||| ||||| |||| ||| Sbjct 5684290 TGCGCAATCATGTATGTGAGCAGGGCGTAGCTGGCGATGTTGAAAGGCACACCTAGGCCC 5684231 Query 6680 ATGTCTCCCGATCGTTGATAGAGCTGGCAGGACAGCTCCCCATTCGCGACGTAGAATTGG 6739 |||||||| |||| || || ||||||||||||||||| | ||| | || ||||| ||| Sbjct 5684230 ATGTCTCCTGATCTCTGGTACAGCTGGCAGGACAGCTCACTGTTCACCACATAGAACTGG 5684171 Query 6740 CAGAGGGTGTGGCACGGGGGGAGCGCCATCAGAGGGAGATC 6780 ||||||| ||||| || || || ||||||||||| ||||| Sbjct 5684170 CAGAGGGCATGGCATGGAGGCAGTGCCATCAGAGGAAGATC 5684130 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448198337699760