Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chlorocebus_20sabaeus_20[refseq_20GCF_5F000409795.2_202014-03-25] 2,004 sequences; 2,789,656,328 total letters Query= NC_005902.1 Length=186250 Score E Sequences producing significant alignments: (Bits) Value seq253 84.2 3e-11 >seq253 Length=75148670 Score = 84.2 bits (92), Expect = 3e-11 Identities = 142/203 (70%), Gaps = 6/203 (3%) Strand=Plus/Plus Query 164502 AGGCTGTAAACATATAAAAGGAATTTTATTACATGGACCTCCTGGTTGCGGTAAAACATT 164561 ||| ||||||||| | ||||| || | ||| ||||||| || || || ||||| || | Sbjct 60386467 AGGTTGTAAACATGTTAAAGGCATCCTGTTATATGGACCCCCAGGCTGTGGTAAGACTCT 60386526 Query 164562 AATGGCTCGATGCATTGCTCAAGCTTTTAAATC---GCGACCCGTTAAAATTGTTAATGG 164618 |||||||| |||| |||| | || ||| | || || ||| | || ||||| Sbjct 60386527 CTTGGCTCGACAGATTGG-CAAGATGTTGAATGCAAGAGAGCCC--AAAGTGGTCAATGG 60386583 Query 164619 TCCTGAATTATTGAACAAATATGTAGGTGAGTCAGAAGCTAATGTTAGAAAGTTGTTTCA 164678 || ||| | | ||||||||||| || || ||||| ||||| || | || | ||| Sbjct 60386584 GCCAGAAATCCTTAACAAATATGTGGGAGAATCAGAGGCTAACATTCGCAAACTTTTTGC 60386643 Query 164679 GGAGGCTGAAGAAGAACAAAAGA 164701 || |||||||| || |||| || Sbjct 60386644 TGATGCTGAAGAGGAGCAAAGGA 60386666 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595857073406400