Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chlorocebus_20sabaeus_20[refseq_20GCF_5F000409795.2_202014-03-25] 2,004 sequences; 2,789,656,328 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq223 93.3 4e-14 >seq223 Length=128539186 Score = 93.3 bits (102), Expect = 4e-14 Identities = 147/211 (70%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 23990 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAA 24049 |||||| | || || || || | ||||| || | || ||| | || || ||| ||| Sbjct 120278613 AATGCAGATCTTCGTGAAGACTCTGACTGGCAAGACCATCACCCTTGAGGTTGAGCCCAG 120278554 Query 24050 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCA 24109 ||||||||||| | ||||| |||||| ||||| |||||||| |||||||| || Sbjct 120278553 TGACACCATCGAAAATGTCAAGGCAAAGATCCAGGACAAGGAAGGCATTCCTCCCGACCA 120278494 Query 24110 ACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAA 24169 ||||| ||||| | | ||| ||||| || ||||||| | | | | || || || Sbjct 120278493 GCAGAGGCTGATCTTTGCCGGAAAGCAGCTGGAAGATGGGCGCACCCTGTCTGACTACAA 120278434 Query 24170 CATTCAAAAAGAATCTACAATTCATTTAGTG 24200 ||| || ||||| || || | || || ||| Sbjct 120278433 CATCCAGAAAGAGTCCACCCTGCACTTGGTG 120278403 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429925499350620