Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chlorocebus_20sabaeus_20[refseq_20GCF_5F000409795.2_202014-03-25] 2,004 sequences; 2,789,656,328 total letters Query= NC_023573.1 Length=142094 Score E Sequences producing significant alignments: (Bits) Value seq657 120 3e-22 >seq657 Length=35860 Score = 120 bits (132), Expect = 3e-22 Identities = 294/441 (67%), Gaps = 6/441 (1%) Strand=Plus/Minus Query 93604 AGGTAGTGGTGCTGTTTACCTAAATATATTCCACAATGATATATTGGATTTATTAAGCTC 93663 ||| || ||||| | ||| ||| ||| || ||| ||||| | | ||||| ||| | Sbjct 33431 AGGAAGCGGTGCCGCTTATTTAAGTATTTTTCACTATGATTTGGTCGATTTTTTAGATTG 33372 Query 93664 TAAGAAAATCAATGCCAGTGAATCTGTTAGACTAGATAAATTATCTATTGGTGTTACAAT 93723 ||||||||| ||||| |||| |||| || | | |||||||||||| | | | Sbjct 33371 TAAGAAAATTAATGCAGATGAAAAATCTAGAATACAGACTTTATCTATTGGTTTAATTGT 33312 Query 93724 CCCTAACAAATTTATGGAGTTAGTTAAAGAAGGTAAACCTTTCTATACTTTTGATACTTA 93783 || | || ||| || | |||| |||||| |||| || |||| || || || | Sbjct 33311 TCCAGATAAGTTTTTGCAATTAGCCAAAGAAAATAAAGACTTTTATATCTTCGAGCCTAA 33252 Query 93784 CGACATTAATAAAGTGTATGGTAAATATTTAGATGAGCT--AAACATTGATGAATGGTAT 93841 ||| | || ||| | ||| ||| || || | ||| |||||||||||||| Sbjct 33251 TACTATTTTTCAAAAATAT--TCAATTTTTTTATCAGATTTAAATTTTGATGAATGGTAT 33194 Query 93842 GATAAGTTACTAGATAATGATAGTATCG-GTAAAGTAAAACATGATGCTAGAGAAGTTAT 93900 || || ||| ||| ||| | ||| | ||| ||| || |||||| || | Sbjct 33193 GACAAATTAGCAGAAGATGCTGAAATCTTGAAAAAGAAATTATC-TGCTAGGTCTATTTT 33135 Query 93901 GACAGATATTGCTAAAACGCAATTAGAATCAGGATACCCTTATGTATTCTATATTGATAA 93960 || | || ||| |||| || || |||||||| || || |||||| | | ||| ||||| Sbjct 33134 AACTAAAATAGCTCAAACTCAGTTTGAATCAGGCTATCCATATGTAATATTTATAGATAA 33075 Query 93961 TGCTAATGATAATCACCCATTGAAAAACCTAGGTAAAGTTAAAATGAGTAACTTATGTAC 94020 ||| ||| | | || || || || |||| || | ||||||||||| ||||| || Sbjct 33074 TGCCAATAGACAGAATCCTTTAAAGAAATTAGGAAAGATAAAAATGAGTAATTTATGCAC 33015 Query 94021 AGAAATTTCACAATTACAAGA 94041 ||||||| ||| | ||||| Sbjct 33014 TGAAATTTTTCAAATTCAAGA 32994 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 454561412951360