Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chlorocebus_20sabaeus_20[refseq_20GCF_5F000409795.2_202014-03-25]
2,004 sequences; 2,789,656,328 total letters
Query= NC_026268.1
Length=139132
Score E
Sequences producing significant alignments: (Bits) Value
seq68 86.0 6e-12
seq98 82.4 7e-11
>seq68
Length=92142175
Score = 86.0 bits (94), Expect = 6e-12
Identities = 153/221 (69%), Gaps = 2/221 (1%)
Strand=Plus/Plus
Query 25171 CAACATGCAAGTGTTTGTAAAAACATTAACCGGAAA-ATCGATCACGATCGAAGTCGAAG 25229
||| ||||| | || || ||||| | || || || ||| ||||| |||| || |||
Sbjct 7889633 CAAAATGCAGATTTTCGTGAAAACCCTTACGGGGAAGATC-ATCACCCTCGAGGTTGAAC 7889691
Query 25230 CCAACGATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCG 25289
|| ||||| || || | ||||| || || ||||| || || || || || |
Sbjct 7889692 CCTCGGATACGATAGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTG 7889751
Query 25290 ATCAGCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATT 25349
||||||||||||| || | | ||||| ||||| ||||||| | | | | || |
Sbjct 7889752 ATCAGCAAAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGACGTACTTTTTCTGACT 7889811
Query 25350 ACAATATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGA 25390
||||||||||||| || || || ||||| | ||||| |||
Sbjct 7889812 ACAATATTCAAAAGGAGTCTACTCTTCATCTTGTGTTGAGA 7889852
>seq98
Length=135778131
Score = 82.4 bits (90), Expect = 7e-11
Identities = 150/220 (68%), Gaps = 0/220 (0%)
Strand=Plus/Plus
Query 25171 CAACATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGC 25230
||| ||||| | || || ||||| | || || || | ||||| |||| | ||| |
Sbjct 2002564 CAAAATGCAGATTTTCGTGAAAACCCTTACGGGGAAGACCATCACCCTCGAGGGTGAACC 2002623
Query 25231 CAACGATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGA 25290
| ||||| || || | ||||| || || ||||| || || || || || ||
Sbjct 2002624 CTCGGATACGATAGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGA 2002683
Query 25291 TCAGCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTA 25350
|||||||||||| || | | ||||| ||||| ||||||| | | | | || ||
Sbjct 2002684 TCAGCAAAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGACGTACTTTGTCTGACTA 2002743
Query 25351 CAATATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGA 25390
|||||||||||| || || || ||||| | ||||| |||
Sbjct 2002744 CAATATTCAAAAGGAGTCTACTCTTCATCTTGTGTTGAGA 2002783
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445083250385280
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |