Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colobus_20angolensis_20palliatus_20[refseq_20GCF_5F000951035.1_20201 5-03-12] 13,124 sequences; 2,970,124,662 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq6472 122 6e-23 seq7015 86.0 4e-12 >seq6472 Length=2227648 Score = 122 bits (134), Expect = 6e-23 Identities = 220/322 (68%), Gaps = 0/322 (0%) Strand=Plus/Minus Query 96898 TAAACAGCCATGGGCATTTTTATGCTAGGGTAAGGGTTATAGTTTTCCAGAATAATGTCA 96957 ||||||||||| |||||| || | || | || || || ||| | || ||| Sbjct 2220129 TAAACAGCCATTTCCATTTTAATAGTTGGATGCGGATTGTACCCTTCAATCTGAAAGTCT 2220070 Query 96958 TTTGCTTTAAAATCATCAATAGATGCAATCTTTCTGGCAAACTTTAGTGTTGGGAAAGGC 97017 | ||||| || |||||||| ||| |||| || ||| || |||||||||| Sbjct 2220069 TCAGCTTTGAAGTCATCAATTTTCTCAACTTTTCGAAGAATCTTGAGCTTTGGGAAAGGT 2220010 Query 97018 CTGGGAGTTCGCGTAAGCTGCTCTGTGAGAGCATCAATGTGATTCACATAAATGTGAGCA 97077 ||||| |||| |||||| | | || | || |||||||||| ||||| || ||| Sbjct 2220009 CTGGGTTCTCGCTGAAGCTGAATTTTCAGTGGCTCGATGTGATTCAGGTAAATATGTGCA 2219950 Query 97078 TCTCCTAAAGTGTGAATAAATTCTCCAGGAACTAAATCAGTGACATGGGCGATCATACAA 97137 ||||| |||||||| | ||| || || || | | |||| || || ||||| | Sbjct 2219949 TCTCCCAAAGTGTGTACAAAGTCACCTGGCTTCAGGCCCGTGATGTGCGCAATCATGTAC 2219890 Query 97138 GTTAATAGAGAATAGCTAGCAATGTTAAAAGGCACCCCTAGTCCCATATCAGCTGATCTT 97197 || | || | ||||| || ||||| |||||||| ||||| ||||| || | ||||| Sbjct 2219889 GTGAGCAGGGCGTAGCTGGCGATGTTGAAAGGCACGCCTAGGCCCATGTCTCCCGATCTC 2219830 Query 97198 TGATATAACTGACAGGAAAGCT 97219 || || | ||| ||||| |||| Sbjct 2219829 TGGTACAGCTGGCAGGACAGCT 2219808 >seq7015 Length=9623085 Score = 86.0 bits (94), Expect = 4e-12 Identities = 94/125 (75%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 97402 TATTCTGCTCCAAAATGCCTCCATTGGAATCCATAAACAGGTCCAAGGTCTCCTTCTTCT 97461 ||||| || |||||||||||||| ||||| |||||||| || || | ||| ||||||||| Sbjct 2246319 TATTCGGCCCCAAAATGCCTCCACTGGAAGCCATAAACTGGACCCAAGTCCCCTTCTTCT 2246260 Query 97462 CTATCACAGAAACCAAGCTTATCTAAATAGGACCTAGATCCATTTGCATCCCAAATGTGC 97521 || |||| || || | || ||| || | |||||||| |||||||| || | | Sbjct 2246259 CTGGTGGAGAACCCCAGGCTGTCCAAAAAGTCTCGGGATCCATTGGCATCCCAGATTTTC 2246200 Query 97522 ACACC 97526 || || Sbjct 2246199 ACTCC 2246195 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346728532332680