Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colobus_20angolensis_20palliatus_20[refseq_20GCF_5F000951035.1_20201 5-03-12] 13,124 sequences; 2,970,124,662 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq6472 143 2e-29 >seq6472 Length=2227648 Score = 143 bits (158), Expect = 2e-29 Identities = 223/319 (70%), Gaps = 0/319 (0%) Strand=Plus/Plus Query 20456 TGTCGTGTCAAATGTATCAACGATCCGCTGATATGGGACTGGGTGTTCCTTTCAATATTG 20515 |||| || || |||| || |||| | || ||||| || || || |||||||| || | Sbjct 2219811 TGTCCTGCCAGCTGTACCAGAGATCGGGAGACATGGGCCTAGGCGTGCCTTTCAACATCG 2219870 Query 20516 CAAGTTATGCGCTGCTTACGTATATGATTGCACATGTTACAGATTTAAAAACGGGTGACT 20575 | || || || ||||| ||||| |||||||| || | || | | || | ||||||| Sbjct 2219871 CCAGCTACGCCCTGCTCACGTACATGATTGCGCACATCACGGGCCTGAAGCCAGGTGACT 2219930 Query 20576 TAGTCCACACCATAGGAGACGCGCATATTTACCTTAATCATATAGAACCTTTAAAATTAC 20635 | || ||||| | ||||| || ||||||||||| ||||| || || || | ||| | | Sbjct 2219931 TTGTACACACTTTGGGAGATGCACATATTTACCTGAATCACATCGAGCCACTGAAAATTC 2219990 Query 20636 AGTTAACACGACAACCAAAACAATTCCCAACTCTTCGCATTACTCGAACTGTTAAAGATA 20695 || | ||| |||| | || ||||||| || ||| ||||| ||| | | | Sbjct 2219991 AGCTTCAGCGAGAACCCAGACCTTTCCCAAAGCTCAAGATTCTTCGAAAAGTTGAGAAAA 2220050 Query 20696 TTAACGATTTTAAAGCTGATGATTTTGTGTTAGAAGGTTATAATCCCCATAATTCAATTC 20755 || | || || |||||||| || ||| | | ||||| || ||||| ||| | ||| Sbjct 2220051 TTGATGACTTCAAAGCTGAAGACTTTCAGATTGAAGGGTACAATCCGCATCCAACTATTA 2220110 Query 20756 CAATGGAAATGTCTGTTTA 20774 |||||||||| ||||||| Sbjct 2220111 AAATGGAAATGGCTGTTTA 2220129 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399120151018180