Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colobus_20angolensis_20palliatus_20[refseq_20GCF_5F000951035.1_20201 5-03-12] 13,124 sequences; 2,970,124,662 total letters Query= NC_003094.2 Length=130759 Score E Sequences producing significant alignments: (Bits) Value seq3960 82.4 6e-11 >seq3960 Length=6554637 Score = 82.4 bits (90), Expect = 6e-11 Identities = 108/150 (72%), Gaps = 0/150 (0%) Strand=Plus/Minus Query 24834 GCAGATATTTGTTAAAACCTTAACCGGCAAAACGATAACCGTCGATGTCGAATCGAGCGA 24893 |||||| ||||| || ||| | || ||||| || || ||| |||| ||||| | || || Sbjct 1989438 GCAGATCTTTGTGAAGACCCTCACAGGCAAGACCATCACCCTCGAGGTCGAGCCCAGTGA 1989379 Query 24894 CAGTGTAGAAACTGTTAAGGAAAAAATTGCTGCAAAAGAAGGCGTACCGGTTGACCAGCA 24953 || || | ||| |||| |||||| | || || ||| | || |||||||||| Sbjct 1989378 CACCACTGAGAATGTCAAGGCCAAAATTCAAGACAAGGAGGGCATTCCACTTGACCAGCA 1989319 Query 24954 ACGTTTAATATATGCGGGCAAACAACTGGA 24983 | | | |||| |||||||||||| ||||| Sbjct 1989318 GCATCTGATATTTGCGGGCAAACAGCTGGA 1989289 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 418237092798080