Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colobus_20angolensis_20palliatus_20[refseq_20GCF_5F000951035.1_20201
5-03-12] 13,124 sequences; 2,970,124,662 total letters
Query= NC_003494.1
Length=111362
Score E
Sequences producing significant alignments: (Bits) Value
seq3971 122 6e-23
>seq3971
Length=4903791
Score = 122 bits (134), Expect = 6e-23
Identities = 394/596 (66%), Gaps = 42/596 (7%)
Strand=Plus/Minus
Query 22345 ATGTACAAGAAGGCCGTTGCGTCTTTTTGGACCGTTGAGGAGGTGGATCTTAGTACTGAT 22404
||||| |||||||| | || || || ||||||| ||||||||||| || | ||
Sbjct 745185 ATGTATAAGAAGGCGGAAGCTTCCTTCTGGACCGCCGAGGAGGTGGACCTGTCCAAGGAC 745126
Query 22405 GTACGCCATTGGACAGAAAAACTGA---CCGAGGCTGAGCGCAGGTTCATGTCTCACATA 22461
|| | || ||| ||| |||| |||||| ||| | || || ||||| ||
Sbjct 745125 GTTTGGCACTGG---GAATCCCTGAAGCCCGAGGA-GAGAGAT--TTTATATCTCATATT 745072
Query 22462 CTGGCATTCTTTGCAATGGCA---GATGGCATTGTAGGCGACAACCTTGTGT-GCAATTT 22517
|||| ||||||||| ||| |||||||| ||| || ||| | ||| || ||||
Sbjct 745071 CTGGTTTTCTTTGCA---GCAAGTGATGGCATAGTAAATGAAAACTTGGTGGAGCGATTT 745015
Query 22518 CGCAAAAGAACTTGACTATATTCCAGAAGCCAGAGCTTTCTATGGGTTTCAGGTGGCAAT 22577
|| || ||| || | || |||||||| | ||||| ||| || || | || ||
Sbjct 745014 AGCCAA-GAAGTTCAG---ATGACAGAAGCCCGCTGTTTCTGTGGCTTCCAAATTGCCAT 744959
Query 22578 GGAAAATATACATGCTGAAATGTATACTCAGCTGATTATCACATTAGTAGCTAAAGAG-- 22635
||||| |||||| |||||||||||| | | ||| ||| | || |||||
Sbjct 744958 AGAAAACATACATTCTGAAATGTATAGTTTCCGTATTGACACTTACATA---AAAGATCC 744902
Query 22636 --AATCAAGCCGCATTGTTTTCA--GCAGCTGAAGATATGCCATGTGTTAAAGCCAAGGC 22691
|| ||| || | ||| || |||| ||||| ||||| || |||||
Sbjct 744901 CAAAGAAAGGGAATTTCTCCTCAATGCCATTGAAACGATGCCTTGTGTCAAGAAGAAGGC 744842
Query 22692 ACAGTGGGC--TGCACAATGGCTGAATGCCACACATAAGT---CTATCGCAACACGTCTC 22746
| | ||||| ||||| ||| | | ||| | ||| |||| | | |||| |
Sbjct 744841 AGATTGGGCCTTGCAC--TGGATTGGGG--ACAAAGAAGCTACCTATGGTGA-ACGTGTT 744787
Query 22747 TTGGCCTTTGCGGCTGTTGAAGGCGTCATGTTTTCTGGGTCATTTGCGGCCATATTCTGG 22806
| | |||||| || | |||||| || |||||||| | ||||| | |||||||||
Sbjct 744786 GTAGTCTTTGCTGCAGCAGAAGGCATC---TTTTCTGGTTATTTTGCATCGATATTCTGG 744730
Query 22807 CTGAAGAAACGTTCGCTCATGCCAGGGTTGGCGTTTTCCAACGAGTTGATTAGCCGTGAC 22866
|| |||||||| || ||||| || | | |||||||| || | |||||| | ||
Sbjct 744729 CTCAAGAAACGAGGACTGATGCCTGGCCTCACATTTTCCAATGAACTTATTAGCAGAGAT 744670
Query 22867 GAAGGTCTACACTGTGACTTTGCTTGTATGCTGTTTAGGCAAATGGCAAACAAACC 22922
|| ||| |||||||||| |||||||| || |||| | || ||| | |||||||
Sbjct 744669 GAGGGTTTACACTGTGATTTTGCTTGCCTGATGTTCAAACACCTGGTACACAAACC 744614
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 356176620880972
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |