Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colobus_20angolensis_20palliatus_20[refseq_20GCF_5F000951035.1_20201
5-03-12] 13,124 sequences; 2,970,124,662 total letters
Query= NC_003529.1
Length=155060
Score E
Sequences producing significant alignments: (Bits) Value
seq7038 95.1 1e-14
seq7115 86.0 6e-12
>seq7038
Length=1003649
Score = 95.1 bits (104), Expect = 1e-14
Identities = 114/155 (74%), Gaps = 0/155 (0%)
Strand=Plus/Plus
Query 139610 TCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTG 139669
||||| ||||| || || ||| |||| || | ||||| ||||| || |||||||| ||
Sbjct 394490 TCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCGGGGGGAATGCCTTCCTTA 394549
Query 139670 TCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACC 139729
|| |||||| || | | ||| | ||||| ||||||||||||| | ||| |
Sbjct 394550 TCCTGGATTTTGGCCTTCACATTTTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATG 394609
Query 139730 GTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764
||||||||||||| || || ||||| || |||||
Sbjct 394610 GTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 394644
>seq7115
Length=1795964
Score = 86.0 bits (94), Expect = 6e-12
Identities = 143/204 (70%), Gaps = 2/204 (1%)
Strand=Plus/Minus
Query 139562 TGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGC-TCGAGTCTTCGAGCTG 139620
|||| |||||||| ||||||||||| | || || || | || | ||||| || ||
Sbjct 164065 TGAAGAGTAGACTCCTTTTGAATGTTGCAGTCAGACAAAGTACGTCCA-TCTTCCAGTTG 164007
Query 139621 TTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTT 139680
| |||||| ||||||| | ||||||||| ||||| || ||||| || || ||| ||
Sbjct 164006 CTCGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTATCCTGGATCTT 163947
Query 139681 TTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGT 139740
|||| | ||| | || || | ||| || ||||||| ||| | ||||| || |
Sbjct 163946 GGCCTTTACATTTTCTGCCGTATCTGAGGGTTCAACCTCAAGGGTGATAGTCTTCCCCCT 163887
Query 139741 CAACGTTTTTACGAATATTTGCAT 139764
| ||||| || || || |||||
Sbjct 163886 TAGGGTTTTCACAAAAATCTGCAT 163863
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 495982620700800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |