Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colobus_20angolensis_20palliatus_20[refseq_20GCF_5F000951035.1_20201
5-03-12] 13,124 sequences; 2,970,124,662 total letters
Query= NC_004117.1
Length=158482
Score E
Sequences producing significant alignments: (Bits) Value
seq5126 95.1 1e-14
>seq5126
Length=8658521
Score = 95.1 bits (104), Expect = 1e-14
Identities = 154/219 (70%), Gaps = 2/219 (1%)
Strand=Plus/Minus
Query 142967 AAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGC-T 143025
|| |||| || || || | || || ||||| || ||||||||||| || |||| |
Sbjct 3006294 AAGCGCAGGACCAAGTGCAGAGTGGACTCTTTCTGGATGTTGTAATCAGACAGGGTGCGT 3006235
Query 143026 CGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTC 143085
| | ||||| || ||||| |||||| |||||| | ||||| || ||||| ||||||||
Sbjct 3006234 CCA-TCTTCCAGCTGTTTCCCAGCAAAGATCAACCTCTGCTGGTCAGGAGGGATGCCTTC 3006176
Query 143086 TTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGT 143145
||||| ||| ||| || | | || | ||||| |||| || || || | ||
Sbjct 3006175 CTTGTCCTGAATCTTTGCCTTGACATTCTCAATGGTGTCGCTGGGCTCGACCTCGAGGGT 3006116
Query 143146 CACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184
| |||||||| |||| || || ||||| || |||||
Sbjct 3006115 GATGGTCTTGCCAGTCAGGGTCTTCACGAAGATCTGCAT 3006077
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 506931224287680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |