Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colobus_20angolensis_20palliatus_20[refseq_20GCF_5F000951035.1_20201
5-03-12] 13,124 sequences; 2,970,124,662 total letters
Query= NC_004156.2
Length=231621
Score E
Sequences producing significant alignments: (Bits) Value
seq6472 129 9e-25
seq6727 89.7 8e-13
>seq6472
Length=2227648
Score = 129 bits (142), Expect = 9e-25
Identities = 203/291 (70%), Gaps = 0/291 (0%)
Strand=Plus/Plus
Query 70334 GACATGGGCCTCGGTGTACCCTTTAACATTGCAAGCTATTCTATGTTGACGCACATGATT 70393
||||||||||| || || || || ||||| || ||||| | || | ||| ||||||||
Sbjct 2219840 GACATGGGCCTAGGCGTGCCTTTCAACATCGCCAGCTACGCCCTGCTCACGTACATGATT 2219899
Query 70394 GCTCACATTACCGGCCTGAAAGCGCACGAGTTCGTACACACCATTGGCGACGCTCACGTG 70453
|| ||||| || |||||||| | || || |||||||| | || || || || |
Sbjct 2219900 GCGCACATCACGGGCCTGAAGCCAGGTGACTTTGTACACACTTTGGGAGATGCACATATT 2219959
Query 70454 TATTTAAATCACATCGAGCCATTAAAGGTGCAACTCGAACGGGAGCCGAGACCTTTTCCC 70513
|| | ||||||||||||||| | || | || || | || || || |||||||| ||
Sbjct 2219960 TACCTGAATCACATCGAGCCACTGAAAATTCAGCTTCAGCGAGAACCCAGACCTTTCCCA 2220019
Query 70514 AAGCTGGAGTTTGCTCGTAAAGTTGAAAATATTGACAGTTTTAAGTACGAAGATTTTATA 70573
||||| || || ||| |||||||| || ||||| || || ||||| |||
Sbjct 2220020 AAGCTCAAGATTCTTCGAAAAGTTGAGAAAATTGATGACTTCAAAGCTGAAGACTTTCAG 2220079
Query 70574 ATAAAAGGTTACGATCCATACCCTAAGATTCCCATGGTTCTGGCTGTTTAG 70624
|| |||| ||| |||| | || | ||| |||| |||||||||||
Sbjct 2220080 ATTGAAGGGTACAATCCGCATCCAACTATTAAAATGGAAATGGCTGTTTAG 2220130
>seq6727
Length=1359887
Score = 89.7 bits (98), Expect = 8e-13
Identities = 106/144 (74%), Gaps = 0/144 (0%)
Strand=Plus/Minus
Query 97179 CTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAACTCCGTACATTCTCTACAAG 97238
|| ||| | |||||| | | |||| ||| || || || ||||| || ||||||||
Sbjct 319536 CTTTGGTATGCCATCATTGAGTCTCAAACAGAAACAGGCACCCCGTATATGCTCTACAAA 319477
Query 97239 GATACCGTGAATCGCAACAGCAACCAACGCCACTTGGGCACCATCAAGGGCTCCAATCTG 97298
||| || ||||| || |||||||| | || |||| |||||||| || |||||||
Sbjct 319476 GATTCCTGTAATCGGAAGAGCAACCAGCAGAACCTGGGAACCATCAAATGCAGCAATCTG 319417
Query 97299 TGCACGGAAATTGTAGAGTACGCC 97322
||||| ||||| || |||||| ||
Sbjct 319416 TGCACAGAAATAGTGGAGTACACC 319393
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 740937629238240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |