Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colobus_20angolensis_20palliatus_20[refseq_20GCF_5F000951035.1_20201 5-03-12] 13,124 sequences; 2,970,124,662 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq6472 129 9e-25 seq6727 89.7 8e-13 >seq6472 Length=2227648 Score = 129 bits (142), Expect = 9e-25 Identities = 203/291 (70%), Gaps = 0/291 (0%) Strand=Plus/Plus Query 70334 GACATGGGCCTCGGTGTACCCTTTAACATTGCAAGCTATTCTATGTTGACGCACATGATT 70393 ||||||||||| || || || || ||||| || ||||| | || | ||| |||||||| Sbjct 2219840 GACATGGGCCTAGGCGTGCCTTTCAACATCGCCAGCTACGCCCTGCTCACGTACATGATT 2219899 Query 70394 GCTCACATTACCGGCCTGAAAGCGCACGAGTTCGTACACACCATTGGCGACGCTCACGTG 70453 || ||||| || |||||||| | || || |||||||| | || || || || | Sbjct 2219900 GCGCACATCACGGGCCTGAAGCCAGGTGACTTTGTACACACTTTGGGAGATGCACATATT 2219959 Query 70454 TATTTAAATCACATCGAGCCATTAAAGGTGCAACTCGAACGGGAGCCGAGACCTTTTCCC 70513 || | ||||||||||||||| | || | || || | || || || |||||||| || Sbjct 2219960 TACCTGAATCACATCGAGCCACTGAAAATTCAGCTTCAGCGAGAACCCAGACCTTTCCCA 2220019 Query 70514 AAGCTGGAGTTTGCTCGTAAAGTTGAAAATATTGACAGTTTTAAGTACGAAGATTTTATA 70573 ||||| || || ||| |||||||| || ||||| || || ||||| ||| Sbjct 2220020 AAGCTCAAGATTCTTCGAAAAGTTGAGAAAATTGATGACTTCAAAGCTGAAGACTTTCAG 2220079 Query 70574 ATAAAAGGTTACGATCCATACCCTAAGATTCCCATGGTTCTGGCTGTTTAG 70624 || |||| ||| |||| | || | ||| |||| ||||||||||| Sbjct 2220080 ATTGAAGGGTACAATCCGCATCCAACTATTAAAATGGAAATGGCTGTTTAG 2220130 >seq6727 Length=1359887 Score = 89.7 bits (98), Expect = 8e-13 Identities = 106/144 (74%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 97179 CTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAACTCCGTACATTCTCTACAAG 97238 || ||| | |||||| | | |||| ||| || || || ||||| || |||||||| Sbjct 319536 CTTTGGTATGCCATCATTGAGTCTCAAACAGAAACAGGCACCCCGTATATGCTCTACAAA 319477 Query 97239 GATACCGTGAATCGCAACAGCAACCAACGCCACTTGGGCACCATCAAGGGCTCCAATCTG 97298 ||| || ||||| || |||||||| | || |||| |||||||| || ||||||| Sbjct 319476 GATTCCTGTAATCGGAAGAGCAACCAGCAGAACCTGGGAACCATCAAATGCAGCAATCTG 319417 Query 97299 TGCACGGAAATTGTAGAGTACGCC 97322 ||||| ||||| || |||||| || Sbjct 319416 TGCACAGAAATAGTGGAGTACACC 319393 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 740937629238240