Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colobus_20angolensis_20palliatus_20[refseq_20GCF_5F000951035.1_20201
5-03-12] 13,124 sequences; 2,970,124,662 total letters
Query= NC_006146.1
Length=171096
Score E
Sequences producing significant alignments: (Bits) Value
seq3 152 6e-32
>seq3
Length=9913731
Score = 152 bits (168), Expect = 6e-32
Identities = 117/139 (84%), Gaps = 0/139 (0%)
Strand=Plus/Minus
Query 10140 AGGGCTACCTGGGATGTCAGGCCCTGTCTGAAATGATCCAGTTTTACCTGGAGGAAGTAA 10199
|||| |||||||| || || ||| ||||||| ||||||||||||||||||||||| || |
Sbjct 3751755 AGGGTTACCTGGGTTGCCAAGCCTTGTCTGAGATGATCCAGTTTTACCTGGAGGAGGTGA 3751696
Query 10200 TGCCACAGGCTGAAAATCAGGACCCCCACGCCAAAGAGCACGTGAACTCTCTGGGCGAGA 10259
|||| || ||||| || || ||||| || ||| |||||||||||||| ||||| ||||
Sbjct 3751695 TGCCCCAAGCTGAGAACCACGACCCAGACATCAAGGAGCACGTGAACTCCCTGGGGGAGA 3751636
Query 10260 ATCTAAAGACCCTAAGGCT 10278
|||| |||||||| |||||
Sbjct 3751635 ATCTGAAGACCCTCAGGCT 3751617
Score = 104 bits (114), Expect = 3e-17
Identities = 74/85 (87%), Gaps = 0/85 (0%)
Strand=Plus/Minus
Query 10359 AGCTGCAGGAAAAAGGAGTCTACAAAGCCATGAGTGAATTTGACATTTTTATTAACTATA 10418
|||| || || ||||| |||||||||||||||||||| |||||||| || || ||||| |
Sbjct 3749391 AGCTCCAAGAGAAAGGCGTCTACAAAGCCATGAGTGAGTTTGACATCTTCATCAACTACA 3749332
Query 10419 TAGAAGCATACATGACCATGAAAAT 10443
||||||| |||||||| ||||||||
Sbjct 3749331 TAGAAGCCTACATGACAATGAAAAT 3749307
Score = 82.4 bits (90), Expect = 8e-11
Identities = 56/63 (89%), Gaps = 0/63 (0%)
Strand=Plus/Minus
Query 10301 TTTCTCCCGTGTGAAAACAAGAGCAAGGCTGTGGAGCAGGTCAAGAATGCCTTCAGCAAG 10360
||||| || |||||||||||||||||||| ||||||||||| ||||||||||| || |||
Sbjct 3750561 TTTCTTCCCTGTGAAAACAAGAGCAAGGCCGTGGAGCAGGTGAAGAATGCCTTTAGTAAG 3750502
Query 10361 CTG 10363
||
Sbjct 3750501 GTG 3750499
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 547289402442240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |