Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colobus_20angolensis_20palliatus_20[refseq_20GCF_5F000951035.1_20201
5-03-12] 13,124 sequences; 2,970,124,662 total letters
Query= NC_009127.1
Length=295146
Score E
Sequences producing significant alignments: (Bits) Value
seq3971 154 3e-32
seq7904 84.2 4e-11
seq2336 84.2 4e-11
>seq3971
Length=4903791
Score = 154 bits (170), Expect = 3e-32
Identities = 394/589 (67%), Gaps = 23/589 (4%)
Strand=Plus/Minus
Query 42285 ATCGAGCACCAGGACATCTGGTCCATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCC 42344
|||||| |||| || |||||| ||||| ||||||||| | ||| ||||||||||
Sbjct 745209 ATCGAGTACCATGATATCTGGCAGATGTATAAGAAGGCGGAAGCTTCCTTCTGGACCGCC 745150
Query 42345 GAGGAGATTGACCTGGCCAAGGACAC--GGCCGGCTGGGAGTCACTGT---CTGAGAACG 42399
|||||| | |||||| |||||||| ||| |||||| || ||| | ||| | |
Sbjct 745149 GAGGAGGTGGACCTGTCCAAGGACGTTTGGCA--CTGGGAATCCCTGAAGCCCGAGGA-G 745093
Query 42400 AAAAGTTTTTCCTCAAAAACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATG 42459
| | |||| || | | | |||| ||||| || || ||| |||||||| ||||
Sbjct 745092 AGAGATTTTATATCTCATA--TTCTGGTTTTCTTTGCAGCAAGTGATGGCATAGTAAATG 745035
Query 42460 AGAACCTGGCCACCAGGTTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACG 42519
| ||| ||| | || | |||| || ||| || || ||||| |||| |
Sbjct 745034 AAAACTTGGTGGAGCGATTTAGCCAAGAAGTTCAGATGACAGAAGCCCGCTGTTTCTGTG 744975
Query 42520 GCTTCCAGATAGCCATAGAGAACGTGCACTCTGAGGTGTACG----CCAAACTGCTCAAC 42575
||||||| || |||||||| ||| | || ||||| |||| || | || ||
Sbjct 744974 GCTTCCAAATTGCCATAGAAAACATACATTCTGAAATGTATAGTTTCCGTATTG----AC 744919
Query 42576 ACGTACATCCTGGATCCCGTCGAGCGTAACGGGCTGTTCAAGGCCATGGAGACGATGCCC 42635
|| ||||| |||||| || | | || |||| ||||| || ||||||||
Sbjct 744918 ACTTACATAAAAGATCCCAAAGAAAGGGAATTTCTCCTCAATGCCATTGAAACGATGCCT 744859
Query 42636 TGCATCAAGAAGAAGGCGGACTGGGCGCTCAACTGGATCGAGAGTCCCGACGCAACGTTC 42695
|| ||||||||||||| || ||||| | ||||||| | | || || || |
Sbjct 744858 TGTGTCAAGAAGAAGGCAGATTGGGCCTTGCACTGGATTGGGGACAAAGAAGCTACCTAT 744799
Query 42696 GGCGAGAGGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCC 42755
|| || | | |||| |||| | || | || |||||||| |||| || || ||
Sbjct 744798 GGTGAACGTGTTGTAGTCTTTGCTGCAGCAGAAGGCATCTT-TTCT--GGTTATTTTGCA 744742
Query 42756 TCCATCTTCTGGCTCAAG-CAGAAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACT 42814
|| || |||||||||||| | ||| | |||||| || ||||| || || || |||||
Sbjct 744741 TCGATATTCTGGCTCAAGAAACGAGGACT-GATGCCTGGCCTCACATTTTCCAATGAACT 744683
Query 42815 CATCAGCAGGGACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTC 42863
|| ||||| || ||||| | || | || ||||| ||||| |||||
Sbjct 744682 TATTAGCAGAGATGAGGGTTTACACTGTGATTTTGCTTGCCTGATGTTC 744634
>seq7904
Length=13651311
Score = 84.2 bits (92), Expect = 4e-11
Identities = 95/125 (76%), Gaps = 2/125 (2%)
Strand=Plus/Minus
Query 42708 GTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGG 42767
||||||||| | || || || ||||||||||| || || | || || || || ||||||
Sbjct 3487719 GTAGCCTTTGCTGCAGTGGAAGGCATCTTCTTTTCCGGTTCTTTTGCATCGATATTCTGG 3487660
Query 42768 CTCAAG-CAGAAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGA 42826
|||||| | ||| | |||||| || ||||| || || || ||||| |||||||| ||
Sbjct 3487659 CTCAAGAAACGAGGACT-GATGCCTGGCCTCACATTTTCCAATGAACTTATCAGCAGAGA 3487601
Query 42827 CGAGG 42831
||||
Sbjct 3487600 TGAGG 3487596
>seq2336
Length=9258750
Score = 84.2 bits (92), Expect = 4e-11
Identities = 95/125 (76%), Gaps = 2/125 (2%)
Strand=Plus/Plus
Query 42706 TGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCT 42765
|||| |||||| | || || || || || |||||||| || | || || | || ||||
Sbjct 5792204 TGGTGGCCTTTGCTGCTGTAGAAGGAATTTTCTTCTCAGGATCTTTTGCTGCTATATTCT 5792263
Query 42766 GGCTCAAGCAGA-AGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGG 42824
|||| ||| ||| |||| | ||||| |||||||| || || || ||||||||||||||
Sbjct 5792264 GGCTAAAGAAGAGAGGTCTT-ATGCCAGGACTCACTTTTTCCAATGAACTCATCAGCAGA 5792322
Query 42825 GACGA 42829
|| ||
Sbjct 5792323 GATGA 5792327
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 944184281154240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |