Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colobus_20angolensis_20palliatus_20[refseq_20GCF_5F000951035.1_20201 5-03-12] 13,124 sequences; 2,970,124,662 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq6472 123 2e-23 seq7015 102 7e-17 >seq6472 Length=2227648 Score = 123 bits (136), Expect = 2e-23 Identities = 136/181 (75%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 20171 AGTGGCTCTATATGCGTTTTGTAGATGTGGGCATCTCCCAACGTGTGAATAAACTCCCCG 20230 |||||||| || || | ||| || || ||||||||||| ||||| | ||| || || Sbjct 2219982 AGTGGCTCGATGTGATTCAGGTAAATATGTGCATCTCCCAAAGTGTGTACAAAGTCACCT 2219923 Query 20231 GGTCTAAGACCAGTAACATGAGCAAGCATATAAGTTAAGAGGGAATAGCTGGCAATGTTA 20290 || | || || || | || |||| ||| || || | |||| |||||||| ||||| Sbjct 2219922 GGCTTCAGGCCCGTGATGTGCGCAATCATGTACGTGAGCAGGGCGTAGCTGGCGATGTTG 2219863 Query 20291 AAAGGAACTCCCAAACCCATGTCTCCCGACCTCTGATACAGCTGACAGGAAAGCTCACCG 20350 ||||| || || | |||||||||||||| ||||| |||||||| ||||| ||||||| | Sbjct 2219862 AAAGGCACGCCTAGGCCCATGTCTCCCGATCTCTGGTACAGCTGGCAGGACAGCTCACTG 2219803 Query 20351 T 20351 | Sbjct 2219802 T 2219802 >seq7015 Length=9623085 Score = 102 bits (112), Expect = 7e-17 Identities = 113/151 (75%), Gaps = 0/151 (0%) Strand=Plus/Minus Query 20249 TGAGCAAGCATATAAGTTAAGAGGGAATAGCTGGCAATGTTAAAAGGAACTCCCAAACCC 20308 || |||| ||| || || | |||| |||||||| ||||| ||||| || || | ||| Sbjct 2250467 TGCGCAATCATGTACGTGAGTAGGGCGTAGCTGGCGATGTTGAAAGGCACGCCTAGGCCC 2250408 Query 20309 ATGTCTCCCGACCTCTGATACAGCTGACAGGAAAGCTCACCGTCAGCTACATAAAATTGA 20368 ||||||||||| ||||| |||||||| ||||| ||||||| || | ||||| || || Sbjct 2250407 ATGTCTCCCGATCTCTGGTACAGCTGGCAGGACAGCTCACTGTTCACCACATAGAACTGG 2250348 Query 20369 CATAACAAGTGACAGGGCGGAAGCGCCATCA 20399 || | ||| || || || || ||||||| Sbjct 2250347 CAGAGGGCGTGGCATGGAGGCAGTGCCATCA 2250317 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 441300392792160