Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colobus_20angolensis_20palliatus_20[refseq_20GCF_5F000951035.1_20201 5-03-12] 13,124 sequences; 2,970,124,662 total letters Query= NC_009334.1 Length=172764 Score E Sequences producing significant alignments: (Bits) Value seq3 114 1e-20 >seq3 Length=9913731 Score = 114 bits (126), Expect = 1e-20 Identities = 116/151 (77%), Gaps = 0/151 (0%) Strand=Plus/Minus Query 9858 TTAAGGGCTACCTTGGATGCCAGGCCCTGTCAGAAATGATCCAATTCTACCTGGAGGAAG 9917 || |||| ||||| || ||||| ||| |||| || |||||||| || ||||||||||| | Sbjct 3751758 TTTAGGGTTACCTGGGTTGCCAAGCCTTGTCTGAGATGATCCAGTTTTACCTGGAGGAGG 3751699 Query 9918 TCATGCCACAGGCTGAAAACCAGGACCCTGAAGCCAAAGACCATGTAAATTCTTTGGGTG 9977 | ||||| || ||||| ||||| ||||| || ||| || || || || || |||| | Sbjct 3751698 TGATGCCCCAAGCTGAGAACCACGACCCAGACATCAAGGAGCACGTGAACTCCCTGGGGG 3751639 Query 9978 AAAATCTAAAGACCCTACGGCTCCGCCTGCG 10008 | ||||| |||||||| |||| | ||||| Sbjct 3751638 AGAATCTGAAGACCCTCAGGCTGAGGCTGCG 3751608 Score = 96.9 bits (106), Expect = 4e-15 Identities = 71/83 (86%), Gaps = 0/83 (0%) Strand=Plus/Minus Query 10080 AGCTGCAGGAAAAAGGAATTTACAAAGCCATGAGTGAATTTGACATTTTTATTAACTACA 10139 |||| || || ||||| | ||||||||||||||||| |||||||| || || ||||||| Sbjct 3749391 AGCTCCAAGAGAAAGGCGTCTACAAAGCCATGAGTGAGTTTGACATCTTCATCAACTACA 3749332 Query 10140 TAGAAGCATACATGACAATTAAA 10162 ||||||| ||||||||||| ||| Sbjct 3749331 TAGAAGCCTACATGACAATGAAA 3749309 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 552626126808960