Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colobus_20angolensis_20palliatus_20[refseq_20GCF_5F000951035.1_20201
5-03-12] 13,124 sequences; 2,970,124,662 total letters
Query= NC_009334.1
Length=172764
Score E
Sequences producing significant alignments: (Bits) Value
seq3 114 1e-20
>seq3
Length=9913731
Score = 114 bits (126), Expect = 1e-20
Identities = 116/151 (77%), Gaps = 0/151 (0%)
Strand=Plus/Minus
Query 9858 TTAAGGGCTACCTTGGATGCCAGGCCCTGTCAGAAATGATCCAATTCTACCTGGAGGAAG 9917
|| |||| ||||| || ||||| ||| |||| || |||||||| || ||||||||||| |
Sbjct 3751758 TTTAGGGTTACCTGGGTTGCCAAGCCTTGTCTGAGATGATCCAGTTTTACCTGGAGGAGG 3751699
Query 9918 TCATGCCACAGGCTGAAAACCAGGACCCTGAAGCCAAAGACCATGTAAATTCTTTGGGTG 9977
| ||||| || ||||| ||||| ||||| || ||| || || || || || |||| |
Sbjct 3751698 TGATGCCCCAAGCTGAGAACCACGACCCAGACATCAAGGAGCACGTGAACTCCCTGGGGG 3751639
Query 9978 AAAATCTAAAGACCCTACGGCTCCGCCTGCG 10008
| ||||| |||||||| |||| | |||||
Sbjct 3751638 AGAATCTGAAGACCCTCAGGCTGAGGCTGCG 3751608
Score = 96.9 bits (106), Expect = 4e-15
Identities = 71/83 (86%), Gaps = 0/83 (0%)
Strand=Plus/Minus
Query 10080 AGCTGCAGGAAAAAGGAATTTACAAAGCCATGAGTGAATTTGACATTTTTATTAACTACA 10139
|||| || || ||||| | ||||||||||||||||| |||||||| || || |||||||
Sbjct 3749391 AGCTCCAAGAGAAAGGCGTCTACAAAGCCATGAGTGAGTTTGACATCTTCATCAACTACA 3749332
Query 10140 TAGAAGCATACATGACAATTAAA 10162
||||||| ||||||||||| |||
Sbjct 3749331 TAGAAGCCTACATGACAATGAAA 3749309
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 552626126808960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |