Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colobus_20angolensis_20palliatus_20[refseq_20GCF_5F000951035.1_20201
5-03-12] 13,124 sequences; 2,970,124,662 total letters
Query= NC_013772.1
Length=176677
Score E
Sequences producing significant alignments: (Bits) Value
seq6460 123 3e-23
seq5126 118 1e-21
seq7038 114 1e-20
seq2558 113 5e-20
seq12126 98.7 1e-15
seq11570 98.7 1e-15
seq6459 98.7 1e-15
seq11015 95.1 1e-14
seq4805 95.1 1e-14
seq1 86.0 7e-12
seq9348 82.4 9e-11
>seq6460
Length=10151297
Score = 123 bits (136), Expect = 3e-23
Identities = 160/220 (73%), Gaps = 1/220 (0%)
Strand=Plus/Plus
Query 46380 GCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGT 46439
|||||||||| |||| || ||| || ||||| |||||||| || |||||||| | |
Sbjct 3934078 GCAACACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCTGAGAGAGTGCGGCCAT 3934137
Query 46440 CGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGT 46499
| || ||||| |||||||| ||||||| |||||||||| | || | | ||||||||
Sbjct 3934138 CTTCCAGCTGTTTGCCGGCAAATATCAGATGCTGCTGGTCAGGTGGGATACCCTCCTTGT 3934197
Query 46500 CCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGG 46559
|| || | ||| || | | ||||| || | || || || | |||||||
Sbjct 3934198 GTTGAATTTTGTCTTTGTCATTCTCAATGGTGTCACTGGGCTCGACCTCAAGGGTGATGG 3934257
Query 46560 TTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT-TTTGC 46598
|||||||||| || || || |||||||| ||||| |||||
Sbjct 3934258 TTTTGCCCGTGAGGGTCTTCACAAAGATCTGCATGTTTGC 3934297
>seq5126
Length=8658521
Score = 118 bits (130), Expect = 1e-21
Identities = 163/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426
|| ||||| | || | |||||| |||| || |||||| ||||| |||||||| ||
Sbjct 3005847 CCACCTCTGAGGCGGAGCACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAC 3005788
Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486
|| || || | || || |||||||| ||||| || |||| | ||||||||||| ||
Sbjct 3005787 AGGGTACGACCATCTTCCAGCTGCTTTCCGGCAAAGATCAGCCTCTGCTGGTCGGGAGGA 3005728
Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 46546
| || ||||| || |||||| ||||| || | | ||||| || | || ||
Sbjct 3005727 ATGCCTTCCTTATCTTGGATCTTTGCCTTGACATTCTCAATGGTGTCACTGGGCTCAACC 3005668
Query 46547 TCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCATT 46594
|| | |||||||| ||||| ||||| || || || ||||| ||||||
Sbjct 3005667 TCGAGGGTGATGGTCTTGCCAGTCAGAGTCTTCACGAAGATCTGCATT 3005620
>seq7038
Length=1003649
Score = 114 bits (126), Expect = 1e-20
Identities = 143/196 (73%), Gaps = 0/196 (0%)
Strand=Plus/Plus
Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461
|||||| ||||| |||||||| || |||||||| | || || ||||||||||| || ||
Sbjct 394453 CTCCTTCTGGATGTTGTAGTCAGAAAGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAA 394512
Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521
|| | | ||||||||||| || | || ||||| ||| ||| || ||| | |
Sbjct 394513 GATGAGCCTCTGCTGGTCGGGGGGAATGCCTTCCTTATCCTGGATTTTGGCCTTCACATT 394572
Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581
| | ||||| || | ||||| |||| |||||||| ||||| ||||| || || ||
Sbjct 394573 TTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCAC 394632
Query 46582 AAAGATTTGCATTTTG 46597
||||| |||||| ||
Sbjct 394633 GAAGATCTGCATTCTG 394648
>seq2558
Length=10987700
Score = 113 bits (124), Expect = 5e-20
Identities = 155/217 (71%), Gaps = 0/217 (0%)
Strand=Plus/Minus
Query 46380 GCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGT 46439
|||||||||| ||| || ||| || ||||| |||||||| || |||||| | | |
Sbjct 486470 GCAACACCAGGTGCGGGGTGGACTCTTTGTGGATGTTGTAGTCTGAGAGAGTGTGGCCAT 486411
Query 46440 CGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGT 46499
| || ||||| |||||||| ||||||| ||||||||||| | || | | ||||||||
Sbjct 486410 CTTCCAGCTGTTTGCCGGCAAATATCAGACGCTGCTGGTCAGGTGGGATACCCTCCTTGT 486351
Query 46500 CCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGG 46559
| || || |||| || | | ||||| || | || || || | |||||||
Sbjct 486350 CTTGAATTTTGGCTTTGACGTTCTCAATAGTGTCACTGGGCTCGACCTCAAGGGTGATGG 486291
Query 46560 TTTTGCCCGTCAGCGTTTTAACAAAGATTTGCATTTT 46596
|||||||||| || || || |||||| ||||| ||
Sbjct 486290 TTTTGCCCGTGAGGGTCTTTGTAAAGATCTGCATGTT 486254
>seq12126
Length=7615049
Score = 98.7 bits (108), Expect = 1e-15
Identities = 152/217 (70%), Gaps = 0/217 (0%)
Strand=Plus/Minus
Query 46381 CAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTC 46440
|||||| ||||| | ||| ||||||||| ||||||||||| || | ||| || | ||
Sbjct 7457960 CAACACAAGATGAAGAGTAGACTCCTTTTGAATATTGTAGTCAGACAAAGTACGTCCATC 7457901
Query 46441 GTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTC 46500
|| || |||||||| || || ||||| | ||||| || | || | | ||||| ||
Sbjct 7457900 TTCCAGTTGCTTGCCAGCAAAGATCAATCTTTGCTGATCAGGAGGAATTCCTTCCTTATC 7457841
Query 46501 CATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGT 46560
| |||||| ||| | | | | ||| || | ||| || || | ||||||||
Sbjct 7457840 CTGGATCTTGGCCTTTACATTTTCTATCGTATCCGAGGGTTCAACCTCGAGGGTGATGGT 7457781
Query 46561 TTTGCCCGTCAGCGTTTTAACAAAGATTTGCATTTTG 46597
|| ||||| || ||||| || || || |||||||||
Sbjct 7457780 CTTCCCCGTAAGGGTTTTCACGAAAATCTGCATTTTG 7457744
>seq11570
Length=13276302
Score = 98.7 bits (108), Expect = 1e-15
Identities = 147/209 (70%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444
||||| |||| || || |||||||| |||||||| || |||||||| | || ||
Sbjct 889449 ACCAGGTGCATGGTGGACTGTTTTTGGATGTTGTAGTCTGAGAGAGTGCGGCCATCCTCC 889508
Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 46504
||||||||||| || ||||||| |||||||||| | || | | |||||||||
Sbjct 889509 AGCTGCTTGCCAGCAAATATCAGATGCTGCTGGTCAGGTGGGATACCCTCCTTGTCTTGA 889568
Query 46505 ATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTG 46564
|| || |||| || | |||| || | || || || | |||||||| |||
Sbjct 889569 ATTTTGGCTTTGAAATTCTCAGTGGTGTAACTGGGCTCGACCTCAAGGGTGATGGTCTTG 889628
Query 46565 CCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
||||| || || || ||||||| |||||
Sbjct 889629 CCCGTGAGGGTCTTCACAAAGAGCTGCAT 889657
>seq6459
Length=16685579
Score = 98.7 bits (108), Expect = 1e-15
Identities = 152/217 (70%), Gaps = 0/217 (0%)
Strand=Plus/Minus
Query 46381 CAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTC 46440
|||||| ||||| | ||| ||||||||| ||||||||||| || | ||| || | ||
Sbjct 968945 CAACACAAGATGAAGAGTAGACTCCTTTTGAATATTGTAGTCAGACAAAGTACGTCCATC 968886
Query 46441 GTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTC 46500
|| || |||||||| || || ||||| | ||||| || | || | | ||||| ||
Sbjct 968885 TTCCAGTTGCTTGCCAGCAAAGATCAATCTTTGCTGATCAGGAGGAATTCCTTCCTTATC 968826
Query 46501 CATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGT 46560
| |||||| ||| | | | | ||| || | ||| || || | ||||||||
Sbjct 968825 CTGGATCTTGGCCTTTACATTTTCTATCGTATCCGAGGGTTCAACCTCGAGGGTGATGGT 968766
Query 46561 TTTGCCCGTCAGCGTTTTAACAAAGATTTGCATTTTG 46597
|| ||||| || ||||| || || || |||||||||
Sbjct 968765 CTTCCCCGTAAGGGTTTTCACGAAAATCTGCATTTTG 968729
>seq11015
Length=12620302
Score = 95.1 bits (104), Expect = 1e-14
Identities = 160/232 (69%), Gaps = 0/232 (0%)
Strand=Plus/Plus
Query 46366 GCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGA 46425
||| ||||| | |||| ||||| |||| || || || ||||| |||||||| ||
Sbjct 5158800 GCCACCTCTCAGACGCTGGACCAGGTGCAGGGTCGATTCTTTCTGGATGTTGTAGTCAGA 5158859
Query 46426 TAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGG 46485
|||||||| | || || |||||| |||| || || || | | |||||||||||
Sbjct 5158860 AAGAGTGCGGCCATCTTCCAGCTGCATGCCTGCAAAGATGAGCCTCTGCTGGTCGGGGAA 5158919
Query 46486 CACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 46545
| || ||||| ||| ||| || ||| | | | | ||||| || | |||||
Sbjct 5158920 GATGCCTTCCTTATCCTGGATATTGGCCTTCACATTTTCGATGGTGTCACTGGGCTCCAC 5158979
Query 46546 ATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCATTTTG 46597
||| | |||||||| ||| | ||||| || || || |||| ||||||||
Sbjct 5158980 ATCAAGGGTGATGGTCTTGTCAGTCAGGGTCTTCACGAAGACCAGCATTTTG 5159031
>seq4805
Length=5228064
Score = 95.1 bits (104), Expect = 1e-14
Identities = 151/217 (70%), Gaps = 0/217 (0%)
Strand=Plus/Minus
Query 46381 CAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTC 46440
|||||| ||||| | ||| ||||||||| ||||||||||| || | ||| || | ||
Sbjct 4473625 CAACACAAGATGAAGAGTAGACTCCTTTTGAATATTGTAGTCAGACAAAGTACGTCCATC 4473566
Query 46441 GTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTC 46500
|| || |||||||| || || |||| | ||||| || | || | | ||||| ||
Sbjct 4473565 TTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTATC 4473506
Query 46501 CATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGT 46560
| |||||| ||| | | | | ||| || | ||| || || | ||||||||
Sbjct 4473505 CTGGATCTTGGCCTTTACATTTTCTATCGTATCCGAGGGTTCAACCTCGAGGGTGATGGT 4473446
Query 46561 TTTGCCCGTCAGCGTTTTAACAAAGATTTGCATTTTG 46597
|| ||||| || ||||| || || || |||||||||
Sbjct 4473445 CTTCCCCGTAAGGGTTTTCACGAAAATCTGCATTTTG 4473409
>seq1
Length=19716903
Score = 86.0 bits (94), Expect = 7e-12
Identities = 149/217 (69%), Gaps = 0/217 (0%)
Strand=Plus/Plus
Query 46381 CAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTC 46440
|||||| ||||| | ||| ||||||||| ||||||||||| || | ||| | | ||
Sbjct 12236692 CAACACAAGATGAAGAGTAGACTCCTTTTGAATATTGTAGTCAGACAAAGTACATCCATC 12236751
Query 46441 GTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTC 46500
|| || |||||||| || || ||||| | ||||| || | || | | |||| ||
Sbjct 12236752 TTCCAGTTGCTTGCCAGCAAAGATCAATCTTTGCTGATCAGGAGGAATTCCTTCCTCATC 12236811
Query 46501 CATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGT 46560
| |||||| ||| | | | ||| || | ||| || || | ||||||||
Sbjct 12236812 CTGGATCTTGGCCTTTACATTTTCTGTCGTATCCGAGGGTTCAACCTCGAGGGTGATGGT 12236871
Query 46561 TTTGCCCGTCAGCGTTTTAACAAAGATTTGCATTTTG 46597
|| ||||| || ||||| || || || |||||||||
Sbjct 12236872 CTTCCCCGTAAGGGTTTTCACGAAAATCTGCATTTTG 12236908
>seq9348
Length=4058791
Score = 82.4 bits (90), Expect = 9e-11
Identities = 65/77 (84%), Gaps = 1/77 (1%)
Strand=Plus/Minus
Query 46404 CCTTT-TGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462
||||| |||||||||||||| || |||||||| | || || ||||| |||||||| |||
Sbjct 2720653 CCTTTCTGGATATTGTAGTCTGAGAGAGTGCGGCCATCTTCCAGCTGTTTGCCGGCAAAT 2720594
Query 46463 ATCAAGCGCTGCTGGTC 46479
|||| |||||||||||
Sbjct 2720593 ATCAGACGCTGCTGGTC 2720577
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 565145672640480
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