Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colobus_20angolensis_20palliatus_20[refseq_20GCF_5F000951035.1_20201 5-03-12] 13,124 sequences; 2,970,124,662 total letters Query= NC_017979.1 Length=43376 Score E Sequences producing significant alignments: (Bits) Value seq5016 96.9 1e-15 >seq5016 Length=4328724 Score = 96.9 bits (106), Expect = 1e-15 Identities = 180/263 (68%), Gaps = 6/263 (2%) Strand=Plus/Plus Query 965 TGGATGTTATGGTAGAATAGCTCCTAGGTCCGGATTAGCGGCTAAGTTTATGATTGATGT 1024 ||| |||||||| ||| ||||||| |||| || || || || || | |||||||| Sbjct 108718 TGGGTGTTATGGAAGAGTAGCTCCATGGTCAGGCTTGGCTGCAAAACACTTTATTGATGT 108777 Query 1025 GGGTGCTGGTGTTATTGATCCAGACTTTAGGGGGAACGTTGGTGTTGTTTTATTTAATTT 1084 || |||||||| || ||| ||| | ||| || || ||||||||||| | ||||| || Sbjct 108778 AGGAGCTGGTGTCATAGATGAAGATTATAGAGGAAATGTTGGTGTTGTACTGTTTAACTT 108837 Query 1085 TAGC---GATAAGCGTTTTCATATTTCAAGAGGTGATAGGATTGCTCAGTTAATTTGTGA 1141 | || || ||| ||| | | || |||||| | | ||| ||| | ||||| || Sbjct 108838 TGGCAAAGAAAAG---TTTGAAGTCAAAAAGGGTGATTGAACTGCACAGCTCATTTGCGA 108894 Query 1142 AAAGGCTGTTTTTCCATCCATTCAAATAGTGGATTCCTTAGAGGATTCGGAAAGGGGTTC 1201 | | | ||| |||| || || | | | | || || || | ||||||||||| Sbjct 108895 ATGGATTTTTTATCCAGAAATAGAAGAAATTCAAGCTTTGGATGACACCGAAAGGGGTTC 108954 Query 1202 TGCAGGATTTGGGTCTACCGGAA 1224 | ||| ||||| ||||| |||| Sbjct 108955 AGGAGGTTTTGGTTCTACTGGAA 108977 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 138659986819344