Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colobus_20angolensis_20palliatus_20[refseq_20GCF_5F000951035.1_20201
5-03-12] 13,124 sequences; 2,970,124,662 total letters
Query= NC_018875.1
Length=119082
Score E
Sequences producing significant alignments: (Bits) Value
seq4805 87.8 1e-12
seq12126 82.4 6e-11
seq6459 82.4 6e-11
seq2558 82.4 6e-11
>seq4805
Length=5228064
Score = 87.8 bits (96), Expect = 1e-12
Identities = 147/213 (69%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 48554 CAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTC 48613
|||||| | ||| || || ||| |||||||||||||| ||||| | | | || | ||
Sbjct 4473625 CAACACAAGATGAAGAGTAGACTCCTTTTGAATATTGTAGTCAGACAAAGTACGTCCATC 4473566
Query 48614 GTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTC 48673
|||| ||||| || ||||| ||||||| || ||||| | |||| || ||||| ||
Sbjct 4473565 TTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTATC 4473506
Query 48674 GCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGT 48733
||||| |||||| | | | || || | || ||||| | || || ||
Sbjct 4473505 CTGGATCTTGGCCTTTACATTTTCTATCGTATCCGAGGGTTCAACCTCGAGGGTGATGGT 4473446
Query 48734 TTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766
|| ||||| | ||||| || |||||||||||
Sbjct 4473445 CTTCCCCGTAAGGGTTTTCACGAAAATCTGCAT 4473413
>seq12126
Length=7615049
Score = 82.4 bits (90), Expect = 6e-11
Identities = 146/213 (69%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 48554 CAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTC 48613
|||||| | ||| || || ||| |||||||||||||| ||||| | | | || | ||
Sbjct 7457960 CAACACAAGATGAAGAGTAGACTCCTTTTGAATATTGTAGTCAGACAAAGTACGTCCATC 7457901
Query 48614 GTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTC 48673
|||| ||||| || ||||| |||| || || ||||| | |||| || ||||| ||
Sbjct 7457900 TTCCAGTTGCTTGCCAGCAAAGATCAATCTTTGCTGATCAGGAGGAATTCCTTCCTTATC 7457841
Query 48674 GCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGT 48733
||||| |||||| | | | || || | || ||||| | || || ||
Sbjct 7457840 CTGGATCTTGGCCTTTACATTTTCTATCGTATCCGAGGGTTCAACCTCGAGGGTGATGGT 7457781
Query 48734 TTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766
|| ||||| | ||||| || |||||||||||
Sbjct 7457780 CTTCCCCGTAAGGGTTTTCACGAAAATCTGCAT 7457748
>seq6459
Length=16685579
Score = 82.4 bits (90), Expect = 6e-11
Identities = 146/213 (69%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 48554 CAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTC 48613
|||||| | ||| || || ||| |||||||||||||| ||||| | | | || | ||
Sbjct 968945 CAACACAAGATGAAGAGTAGACTCCTTTTGAATATTGTAGTCAGACAAAGTACGTCCATC 968886
Query 48614 GTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTC 48673
|||| ||||| || ||||| |||| || || ||||| | |||| || ||||| ||
Sbjct 968885 TTCCAGTTGCTTGCCAGCAAAGATCAATCTTTGCTGATCAGGAGGAATTCCTTCCTTATC 968826
Query 48674 GCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGT 48733
||||| |||||| | | | || || | || ||||| | || || ||
Sbjct 968825 CTGGATCTTGGCCTTTACATTTTCTATCGTATCCGAGGGTTCAACCTCGAGGGTGATGGT 968766
Query 48734 TTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766
|| ||||| | ||||| || |||||||||||
Sbjct 968765 CTTCCCCGTAAGGGTTTTCACGAAAATCTGCAT 968733
>seq2558
Length=10987700
Score = 82.4 bits (90), Expect = 6e-11
Identities = 150/216 (69%), Gaps = 4/216 (2%)
Strand=Plus/Minus
Query 48553 GCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGT 48612
||||||||| || | ||| |||||| || || ||||| || || ||| | | | |
Sbjct 486470 GCAACACCAGGTGCGGGGTGGACTCTTTGTGGATGTTGTAGTCTGAGAGAGTGTGGCCAT 486411
Query 48613 CGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGT 48672
| |||| ||| || |||||||||||||| ||||| || || | || | ||||||||||
Sbjct 486410 CTTCCAGCTGTTTGCCGGCAAATATCAGACGCTGCTGGTCAGGTGGGATACCCTCCTTGT 486351
Query 48673 CGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGAC--GCCTCCACCTCCACCGTAAT 48730
| ||| ||| | ||| | | || | | | | || | ||| ||||| | || ||
Sbjct 486350 CTTGAAT-TTTGGCTTTGACGTTCTCA-ATAGTGTCACTGGGCTCGACCTCAAGGGTGAT 486293
Query 48731 CGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766
||||| ||||| | || ||| ||| ||||||||
Sbjct 486292 GGTTTTGCCCGTGAGGGTCTTTGTAAAGATCTGCAT 486257
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 380876669507052
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |