Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colobus_20angolensis_20palliatus_20[refseq_20GCF_5F000951035.1_20201 5-03-12] 13,124 sequences; 2,970,124,662 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq3971 127 4e-24 seq7904 93.3 8e-14 >seq3971 Length=4903791 Score = 127 bits (140), Expect = 4e-24 Identities = 396/601 (66%), Gaps = 28/601 (5%) Strand=Plus/Minus Query 25474 GATATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGAT 25533 ||||| ||| ||||||| |||||||| || || |||||||||||| ||| | || Sbjct 745197 GATATCTGGCAGATGTATAAGAAGGCGGAAGCTTCCTTCTGGACCGCCGAGGAGGTGGAC 745138 Query 25534 CTGGCCAAGGACATGGACGGCTGGTACGCTCT--ATCCAAAGACGAGCAGCATTT---TC 25588 ||| |||||||| | |||| | | || | || || ||| || ||| || Sbjct 745137 CTGTCCAAGGACGTTTGGCACTGGGAATCCCTGAAGCCCGAGGAGAG-AGATTTTATATC 745079 Query 25589 TCAAGTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCG 25648 ||| | | ||| ||||||||||| |||||| ||||| || || || || | Sbjct 745078 TCATATTCTGGTT----TTCTTTGCAGCAAGTGATGGCATAGTAAATGAAAACTTGGTGG 745023 Query 25649 AGAGATTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGG 25708 || |||| | | ||||| ||| || ||| ||||||| || ||||| || | Sbjct 745022 AGCGATTTAGCCAAGAAGTTCAGATGACAGAAGCCCGCTGTTTCTGTGGCTTCCAAATTG 744963 Query 25709 CCATCGAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGA--TGACG--TACATTACA 25764 |||| ||||| | || ||||| ||||| || ||| | |||| ||||| | | Sbjct 744962 CCATAGAAAACATACATTCTGAAATGTAT----AGTTTCCGTATTGACACTTACATAAAA 744907 Query 25765 GACGTCGCCGAGAGAGATCGGCTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGG 25824 || | || || || || | |||||| || || || | |||||| | Sbjct 744906 GATCCCAAAGAAAGGGAATTTCTCCTCAATGCCATTGAAACGATGCCTTGTGTCAAGAAG 744847 Query 25825 AAGGCGCGGTGGGCCATGAAGTGGATCAACAGCCAGAGC-GCTACGTTTGGCGAGCGGCT 25883 ||||| |||||| || | ||||| | || || ||||| | ||| || || | Sbjct 744846 AAGGCAGATTGGGCCTTGCACTGGATTGGG-GACAAAGAAGCTACCTATGGTGAACGTGT 744788 Query 25884 GGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTG 25943 |||| ||||||||| | || |||||||||| |||| ||||| | || ||||| Sbjct 744787 TGTAGTCTTTGCTGCAGCAGAAGGCATCTTTTCT---GGTTATTTTGCATCGATATTCTG 744731 Query 25944 GCTCAAGCAGAAGGGGAC-CATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGG 26002 ||||||| | | | |||| ||||| || || |||||||| || || || ||||| | Sbjct 744730 GCTCAAG-AAACGAGGACTGATGCCTGGCCTCACATTTTCCAATGAACTTATTAGCAGAG 744672 Query 26003 ACGAGGGTCTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTTGCTCCACAAAC 26062 | |||||| | ||| | |||||||| |||||| | | || ||| || | ||||||| Sbjct 744671 ATGAGGGTTTACACTGTGATTTTGCTTGCCTGATGTTCA---AACACCTGGTACACAAAC 744615 Query 26063 C 26063 | Sbjct 744614 C 744614 >seq7904 Length=13651311 Score = 93.3 bits (102), Expect = 8e-14 Identities = 97/125 (78%), Gaps = 2/125 (2%) Strand=Plus/Minus Query 25885 GTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGG 25944 |||||||||||||| ||||| |||||||| || |||||| ||||| | || |||||| Sbjct 3487719 GTAGCCTTTGCTGCAGTGGAAGGCATCTTCTTTTCCGGTTCTTTTGCATCGATATTCTGG 3487660 Query 25945 CTCAAGCAGAAGGGGAC-CATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGA 26003 |||||| | | | |||| ||||| || || |||||||| || || |||||||| || Sbjct 3487659 CTCAAG-AAACGAGGACTGATGCCTGGCCTCACATTTTCCAATGAACTTATCAGCAGAGA 3487601 Query 26004 CGAGG 26008 |||| Sbjct 3487600 TGAGG 3487596 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928692423010560