Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colobus_20angolensis_20palliatus_20[refseq_20GCF_5F000951035.1_20201
5-03-12] 13,124 sequences; 2,970,124,662 total letters
Query= NC_021312.1
Length=459984
Score E
Sequences producing significant alignments: (Bits) Value
seq3971 113 1e-19
seq7237 91.5 4e-13
>seq3971
Length=4903791
Score = 113 bits (124), Expect = 1e-19
Identities = 367/565 (65%), Gaps = 9/565 (2%)
Strand=Plus/Minus
Query 133076 TTTGTTATGTTCCCAATTAAGGACGACGAGATTTGGCAGATGTATAAAAAACAGCAAGAT 133135
||||| || ||||| || || || | || || |||||||||||||| || | ||| |
Sbjct 745224 TTTGTCATCTTCCCCATCGAGTACCATGATATCTGGCAGATGTATAAGAAGGCGGAAGCT 745165
Query 133136 TTATTTTGGACTTCAACTGAAGTAGATTTATCCAAAGACCCAGCCCACTGGGAAGCCCTT 133195
| || ||||| | || || || | ||||| ||| ||||||||| ||||
Sbjct 745164 TCCTTCTGGACCGCCGAGGAGGTGGACCTGTCCAAGGACGTTTGGCACTGGGAATCCCTG 745105
Query 133196 ACTGGGGATGAAAAACATTTTATTTCTATGATTTTAGCGTTTTTTGCTGCGAGTGATGGT 133255
| || || | | ||||||| ||| ||| | | || ||||| || ||||||||
Sbjct 745104 AAGCCCGAGGAGAGAGATTTTATATCTCATATTCTGGTTTTCTTTGCAGCAAGTGATGGC 745045
Query 133256 ATTGTTCTTGAAAATTTAGGAACACGGTTTATGGGAGAAGTTCAACTGGCCGAAGCCCGT 133315
|| || |||||| || | || |||| ||||||||| || | ||||||||
Sbjct 745044 ATAGTAAATGAAAACTTGGTGGAGCGATTTAGCCAAGAAGTTCAGATGACAGAAGCCCGC 744985
Query 133316 GCCTTTTATGGGCTACAGATTGCGATGGAAAATATCCATTCTATCACATATTCTACTCTA 133375
|| | ||| | || ||||| || ||||| || |||||| | ||| | |
Sbjct 744984 TGTTTCTGTGGCTTCCAAATTGCCATAGAAAACATACATTCTGAAATGTATAGTTTCCGT 744925
Query 133376 ATTGATACTTACATCAAAGATACCGTCCAGAAGCACAAACTATTCAACGCCATT--AGCG 133433
||||| |||||||| |||||| || | | | | || |||| |||||| | ||
Sbjct 744924 ATTGACACTTACATAAAAGATCCCAAAGAAAGGGAATTTCTCCTCAATGCCATTGAAACG 744865
Query 133434 AATTTCCTTGTATTAAAAAGAAATCTGACTGGGCTATTAAATGGATCCAGGACAAGCGTG 133493
| | |||||| | || ||||| | || ||||| | | ||||| |||||| |
Sbjct 744864 A--TGCCTTGTGTCAAGAAGAAGGCAGATTGGGCCTTGCACTGGATTGGGGACAAAGAAG 744807
Query 133494 CGAGTTTTGCTACTCGTCTCGTTGCTTTTGCTGTAGTAGAGGGCAtttttttCAGTGGTG 133553
| | | || | ||| | || | ||||||| || ||| ||||| |||| ||||
Sbjct 744806 CTACCTATGGTGAACGTGTTGTAGTCTTTGCTGCAGCAGAAGGCATCTTTT---CTGGT- 744751
Query 133554 CGTTCTGC-TCTATTTTTTGGCTTAAAAAGCGTGGTATTCTACCTGGACTGTGTTTTTCT 133612
|| ||| || || || ||||| || || || || | | ||||| || |||||
Sbjct 744750 TATTTTGCATCGATATTCTGGCTCAAGAAACGAGGACTGATGCCTGGCCTCACATTTTCC 744691
Query 133613 AACGAACTTATTTCAAGGGACGAGG 133637
|| ||||||||| || || ||||
Sbjct 744690 AATGAACTTATTAGCAGAGATGAGG 744666
>seq7237
Length=5934118
Score = 91.5 bits (100), Expect = 4e-13
Identities = 160/233 (69%), Gaps = 0/233 (0%)
Strand=Plus/Minus
Query 302607 ACCAGTTGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACCACCCATAGCATG 302666
|||||| || || || ||||| || ||||| || || ||||||| ||||| || ||
Sbjct 3551916 ACCAGTCTCAGCAGTCTTGACAGCCGTGTCAATGAGCCCCTCACGACCCCCCATGGCGTG 3551857
Query 302667 GAAGAATAGCTCTTCCGGTCGTAGCCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGC 302726
||| || | ||| ||| || || | | ||||| |||| || || |||||
Sbjct 3551856 GAAAAAGAACTCGGTGGGTGTGAGGCCGGCTAGGTAGGAGTTCTCCACAAAGCCACGGCT 3551797
Query 302727 CTCGGGCGAATCGTCGAACTTGGTAAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGG 302786
||||||| | ||| |||| | ||||| ||||| |||| || || |||| ||||
Sbjct 3551796 CTCGGGCCCGTAGTCATCCTTGATGAAGTGAGGCAGAGTCCGGTGCTTGAAGCCAAATGG 3551737
Query 302787 GATACGCTTTCCATCAACGTTCTGCTGTCCCAGGCACGAAATCATCTGCGAAA 302839
|| ||||| || || ||||||||||| || | | | ||| | ||| ||||
Sbjct 3551736 AATCCGCTTGCCCTCCACGTTCTGCTGCCCGACGACAGCAATGACCTGGGAAA 3551684
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1471570112030788
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |