Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colobus_20angolensis_20palliatus_20[refseq_20GCF_5F000951035.1_20201
5-03-12] 13,124 sequences; 2,970,124,662 total letters
Query= NC_024625.1
Length=151109
Score E
Sequences producing significant alignments: (Bits) Value
seq5126 150 2e-31
seq7038 122 8e-23
seq2558 109 5e-19
seq6460 105 6e-18
seq11792 98.7 1e-15
seq11570 98.7 1e-15
seq11015 95.1 1e-14
seq3960 93.3 4e-14
seq4805 89.7 5e-13
seq10792 86.0 6e-12
seq12126 84.2 2e-11
seq6459 84.2 2e-11
seq4138 82.4 7e-11
>seq5126
Length=8658521
Score = 150 bits (166), Expect = 2e-31
Identities = 152/198 (77%), Gaps = 0/198 (0%)
Strand=Plus/Minus
Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCC 133522
||||||||||||||| || ||||| || || |||| | || || |||||||| ||
Sbjct 3006046 GGTGGACTCTTTCTGGATGTTGTAGTCAGACAGCGTGCGCCCATCTTCCAGCTGCTTTCC 3005987
Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582
|| | || | || ||||||||| |||||||||||||||||||| ||||||| |||
Sbjct 3005986 AGCAAAGATCAACCTCTGCTGGTCAGGAGGGATGCCTTCCTTGTCTTGGATCTTTGCCTT 3005927
Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642
|| | ||| | |||||| ||||||| || |||| ||| | ||| ||||| ||||| ||
Sbjct 3005926 GACATTCTCGATGGTGTCGCTGGGCTCGACCTCGAGGGTAATGGTCTTGCCAGTCAGGGT 3005867
Query 133643 TTTTACGAAAATCTGCAT 133660
|| ||||| ||||||||
Sbjct 3005866 CTTCACGAAGATCTGCAT 3005849
Score = 149 bits (164), Expect = 6e-31
Identities = 154/199 (77%), Gaps = 2/199 (1%)
Strand=Plus/Minus
Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521
||||||||| ||||| || ||||| || || || ||| | || || |||||||| |
Sbjct 3005818 GGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTACGACCA-TCTTCCAGCTGCTTTC 3005760
Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581
| || | || |||| ||||||||||||||| ||||||||||| || ||||||| ||
Sbjct 3005759 CGGCAAAGATCAGCCTCTGCTGGTCGGGAGGAATGCCTTCCTTATCTTGGATCTTTGCCT 3005700
Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641
||| | ||||| ||||| ||||||| || |||| ||||| ||| ||||| |||||||
Sbjct 3005699 TGACATTCTCAATGGTGTCACTGGGCTCAACCTCGAGGGTGATGGTCTTGCCAGTCAGAG 3005640
Query 133642 TTTTTACGAAAATCTGCAT 133660
| || ||||| ||||||||
Sbjct 3005639 TCTTCACGAAGATCTGCAT 3005621
Score = 147 bits (162), Expect = 2e-30
Identities = 153/198 (77%), Gaps = 2/198 (1%)
Strand=Plus/Minus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522
|||||||||||||| || |||||||| || ||| | | | || || ||||| || ||
Sbjct 3006273 GTGGACTCTTTCTGGATGTTGTAATCAGACAGGGTGCGTCCA-TCTTCCAGCTGTTTCCC 3006215
Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582
|| | || | || ||||||||| |||||||||||||||||||| |||||| |||
Sbjct 3006214 AGCAAAGATCAACCTCTGCTGGTCAGGAGGGATGCCTTCCTTGTCCTGAATCTTTGCCTT 3006155
Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642
|| | ||||| |||||| ||||||| || |||| ||||| ||| ||||| ||||| ||
Sbjct 3006154 GACATTCTCAATGGTGTCGCTGGGCTCGACCTCGAGGGTGATGGTCTTGCCAGTCAGGGT 3006095
Query 133643 TTTTACGAAAATCTGCAT 133660
|| ||||| ||||||||
Sbjct 3006094 CTTCACGAAGATCTGCAT 3006077
>seq7038
Length=1003649
Score = 122 bits (134), Expect = 8e-23
Identities = 148/199 (74%), Gaps = 2/199 (1%)
Strand=Plus/Plus
Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521
||| ||||| ||||| || ||||| || | ||| | | | || || ||||||||||
Sbjct 394447 GGTCGACTCCTTCTGGATGTTGTAGTCAGAAAGAGTGCGGCCA-TCTTCCAGCTGCTTGC 394505
Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581
| || | ||||||| |||||||||||| || ||||||||||| || ||| || ||
Sbjct 394506 CTGCAAAGATGAGCCTCTGCTGGTCGGGGGGAATGCCTTCCTTATCCTGGATTTTGGCCT 394565
Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641
| | | || | ||||| |||||||||| || | ||||| ||| ||||||||||| |
Sbjct 394566 TCACATTTTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCGGTCAGGG 394625
Query 133642 TTTTTACGAAAATCTGCAT 133660
| || ||||| ||||||||
Sbjct 394626 TCTTCACGAAGATCTGCAT 394644
>seq2558
Length=10987700
Score = 109 bits (120), Expect = 5e-19
Identities = 148/201 (74%), Gaps = 4/201 (2%)
Strand=Plus/Minus
Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521
|||||||||||| || || ||||| || | ||| | | | || || ||||| ||||
Sbjct 486454 GGTGGACTCTTTGTGGATGTTGTAGTCTGAGAGAGTGTGGCCA-TCTTCCAGCTGTTTGC 486396
Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGC- 133580
| || | || || ||||||||||| || ||||| || |||||||| ||| ||| ||
Sbjct 486395 CGGCAAATATCAGACGCTGCTGGTCAGGTGGGATACCCTCCTTGTC-TTGAATTTTGGCT 486337
Query 133581 TTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGA 133640
|||| | ||||| ||||| ||||||| || || | ||||| ||||||||| || ||
Sbjct 486336 TTGACGTTCTCAATAGTGTCACTGGGCTCGACCTCAAGGGTGATGGTTTTGCCCGTGAGG 486277
Query 133641 GTTTTTACGAAAATCTGCATG 133661
|| ||| || |||||||||
Sbjct 486276 GTCTTTGTAAAGATCTGCATG 486256
>seq6460
Length=10151297
Score = 105 bits (116), Expect = 6e-18
Identities = 147/201 (73%), Gaps = 4/201 (2%)
Strand=Plus/Plus
Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521
||||||||||||||| || ||||| || | ||| | | | || || ||||| ||||
Sbjct 3934094 GGTGGACTCTTTCTGGATGTTGTAGTCTGAGAGAGTGCGGCCA-TCTTCCAGCTGTTTGC 3934152
Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTG-ATCTTTTGC 133580
| || | || || |||||||||| || ||||| || ||||||| | || || || |
Sbjct 3934153 CGGCAAATATCAGATGCTGCTGGTCAGGTGGGATACCCTCCTTGT-GTTGAATTTTGTCT 3934211
Query 133581 TTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGA 133640
||| | ||||| ||||| ||||||| || || | ||||| ||||||||| || ||
Sbjct 3934212 TTGTCATTCTCAATGGTGTCACTGGGCTCGACCTCAAGGGTGATGGTTTTGCCCGTGAGG 3934271
Query 133641 GTTTTTACGAAAATCTGCATG 133661
|| || || || |||||||||
Sbjct 3934272 GTCTTCACAAAGATCTGCATG 3934292
>seq11792
Length=7415672
Score = 98.7 bits (108), Expect = 1e-15
Identities = 145/203 (71%), Gaps = 2/203 (1%)
Strand=Plus/Plus
Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521
||||||||||||||| || || ||||| | ||| | | | ||||| | ||| ||||
Sbjct 6703186 GGTGGACTCTTTCTGGATGTTATAATCTGAAAGAGTGTGGCCA-TCCTCCAACTGTTTGC 6703244
Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581
|| | | || || |||||||||| || ||||||| |||||||| |||||| |
Sbjct 6703245 CCACAAATATCAGATGCTGCTGGTCAGGTAGGATGCCCTCCTTGTCATGGATCTTGGCTT 6703304
Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641
||| | ||| | ||||| |||||| || || | ||||| |||| | || || || |
Sbjct 6703305 TGACATTTTCACCGGTGTCACTGGGCTGGACCTCAAAGGTGATGGTTCTTCCTGTGAGGG 6703364
Query 133642 TTTTTACGAAAATCTGCATGGCT 133664
| ||||| | ||||||||| ||
Sbjct 6703365 TCTTTACAGAGATCTGCATGTCT 6703387
>seq11570
Length=13276302
Score = 98.7 bits (108), Expect = 1e-15
Identities = 148/205 (72%), Gaps = 4/205 (2%)
Strand=Plus/Plus
Query 133458 TGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTG 133516
|| |||||||||| ||| || || ||||| || | ||| | | | ||||| |||||
Sbjct 889455 TGCATGGTGGACTGTTTTTGGATGTTGTAGTCTGAGAGAGTGCGGCCA-TCCTCCAGCTG 889513
Query 133517 CTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTT 133576
|||||| || | || || |||||||||| || ||||| || |||||||| ||| ||
Sbjct 889514 CTTGCCAGCAAATATCAGATGCTGCTGGTCAGGTGGGATACCCTCCTTGTC-TTGAATTT 889572
Query 133577 TTGC-TTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGG 133635
| || |||| | |||| |||| ||||||| || || | ||||| ||| ||||| |
Sbjct 889573 TGGCTTTGAAATTCTCAGTGGTGTAACTGGGCTCGACCTCAAGGGTGATGGTCTTGCCCG 889632
Query 133636 TCAGAGTTTTTACGAAAATCTGCAT 133660
| || || || || || | ||||||
Sbjct 889633 TGAGGGTCTTCACAAAGAGCTGCAT 889657
>seq11015
Length=12620302
Score = 95.1 bits (104), Expect = 1e-14
Identities = 142/199 (71%), Gaps = 2/199 (1%)
Strand=Plus/Plus
Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521
||| || |||||||| || ||||| || | ||| | | | || || |||||| |||
Sbjct 5158830 GGTCGATTCTTTCTGGATGTTGTAGTCAGAAAGAGTGCGGCCA-TCTTCCAGCTGCATGC 5158888
Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581
| || | ||||||| |||||||||||| |||||||||||| || ||| || ||
Sbjct 5158889 CTGCAAAGATGAGCCTCTGCTGGTCGGGGAAGATGCCTTCCTTATCCTGGATATTGGCCT 5158948
Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641
| | | || | ||||| |||||||||| || | ||||| ||| ||| | ||||| |
Sbjct 5158949 TCACATTTTCGATGGTGTCACTGGGCTCCACATCAAGGGTGATGGTCTTGTCAGTCAGGG 5159008
Query 133642 TTTTTACGAAAATCTGCAT 133660
| || ||||| | | ||||
Sbjct 5159009 TCTTCACGAAGACCAGCAT 5159027
>seq3960
Length=6554637
Score = 93.3 bits (102), Expect = 4e-14
Identities = 140/195 (72%), Gaps = 7/195 (4%)
Strand=Plus/Plus
Query 133465 TGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCCG 133524
||||||||||||| || ||| | || | ||| || ||| ||||| |||||||
Sbjct 1989250 TGGACTCTTTCTGGATGTTGCAGTCTGAGAGAGTG--CG---GCTCCAGCTGTTTGCCCG 1989304
Query 133525 CGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTG-CTTG 133583
| | || || |||||||||| | || ||||| |||||||| ||| ||| | ||||
Sbjct 1989305 CAAATATCAGATGCTGCTGGTCAAGTGGAATGCCCTCCTTGTC-TTGAATTTTGGCCTTG 1989363
Query 133584 AGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTT 133643
| | |||| ||||| ||||||| || |||| ||||| ||| ||||| || || ||
Sbjct 1989364 ACATTCTCAGTGGTGTCACTGGGCTCGACCTCGAGGGTGATGGTCTTGCCTGTGAGGGTC 1989423
Query 133644 TTTACGAAAATCTGC 133658
|| || || ||||||
Sbjct 1989424 TTCACAAAGATCTGC 1989438
>seq4805
Length=5228064
Score = 89.7 bits (98), Expect = 5e-13
Identities = 140/198 (71%), Gaps = 2/198 (1%)
Strand=Plus/Minus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522
|| ||||| || || |||||||| || || || | | | || || || ||||||||
Sbjct 4473609 GTAGACTCCTTTTGAATATTGTAGTCAGACAAAGTACGTCCA-TCTTCCAGTTGCTTGCC 4473551
Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582
|| | || || | ||||| || ||||| || |||||||| || |||||| |||
Sbjct 4473550 AGCAAAGATCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTATCCTGGATCTTGGCCTT 4473491
Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642
| | || | ||| || | ||| || || |||| ||||| ||| || || || || ||
Sbjct 4473490 TACATTTTCTATCGTATCCGAGGGTTCAACCTCGAGGGTGATGGTCTTCCCCGTAAGGGT 4473431
Query 133643 TTTTACGAAAATCTGCAT 133660
||| ||||||||||||||
Sbjct 4473430 TTTCACGAAAATCTGCAT 4473413
>seq10792
Length=8297812
Score = 86.0 bits (94), Expect = 6e-12
Identities = 142/200 (71%), Gaps = 4/200 (2%)
Strand=Plus/Plus
Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521
||||||||||| ||| || || || || | || | | | ||||| |||| ||||
Sbjct 3779125 GGTGGACTCTTCCTGGATGTTCTAGTCTGAGAGACTGCGGCCA-TCCTCCGGCTGTTTGC 3779183
Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGC- 133580
|||| | || || | ||||||||| || ||||||| |||||||| ||| || ||
Sbjct 3779184 CCGCAAATATCAGACACTGCTGGTCAGGCAGGATGCCCTCCTTGTCTTGGAT-TTCGGCT 3779242
Query 133581 TTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGA 133640
|||| | |||| ||||| |||| |||||| || ||||| ||| ||||| | ||
Sbjct 3779243 TTGACATTCTCAGTGGTGTCAGTGGCCTCCACCTCAGGGGTGATGGTCTTGCCCATGAGG 3779302
Query 133641 GTTTTTACGAAAATCTGCAT 133660
|| || || || ||||||||
Sbjct 3779303 GTGTTCACAAAGATCTGCAT 3779322
>seq12126
Length=7615049
Score = 84.2 bits (92), Expect = 2e-11
Identities = 139/198 (70%), Gaps = 2/198 (1%)
Strand=Plus/Minus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522
|| ||||| || || |||||||| || || || | | | || || || ||||||||
Sbjct 7457944 GTAGACTCCTTTTGAATATTGTAGTCAGACAAAGTACGTCCA-TCTTCCAGTTGCTTGCC 7457886
Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582
|| | || | | ||||| || ||||| || |||||||| || |||||| |||
Sbjct 7457885 AGCAAAGATCAATCTTTGCTGATCAGGAGGAATTCCTTCCTTATCCTGGATCTTGGCCTT 7457826
Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642
| | || | ||| || | ||| || || |||| ||||| ||| || || || || ||
Sbjct 7457825 TACATTTTCTATCGTATCCGAGGGTTCAACCTCGAGGGTGATGGTCTTCCCCGTAAGGGT 7457766
Query 133643 TTTTACGAAAATCTGCAT 133660
||| ||||||||||||||
Sbjct 7457765 TTTCACGAAAATCTGCAT 7457748
>seq6459
Length=16685579
Score = 84.2 bits (92), Expect = 2e-11
Identities = 139/198 (70%), Gaps = 2/198 (1%)
Strand=Plus/Minus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522
|| ||||| || || |||||||| || || || | | | || || || ||||||||
Sbjct 968929 GTAGACTCCTTTTGAATATTGTAGTCAGACAAAGTACGTCCA-TCTTCCAGTTGCTTGCC 968871
Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582
|| | || | | ||||| || ||||| || |||||||| || |||||| |||
Sbjct 968870 AGCAAAGATCAATCTTTGCTGATCAGGAGGAATTCCTTCCTTATCCTGGATCTTGGCCTT 968811
Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642
| | || | ||| || | ||| || || |||| ||||| ||| || || || || ||
Sbjct 968810 TACATTTTCTATCGTATCCGAGGGTTCAACCTCGAGGGTGATGGTCTTCCCCGTAAGGGT 968751
Query 133643 TTTTACGAAAATCTGCAT 133660
||| ||||||||||||||
Sbjct 968750 TTTCACGAAAATCTGCAT 968733
>seq4138
Length=9750826
Score = 82.4 bits (90), Expect = 7e-11
Identities = 140/199 (70%), Gaps = 8/199 (4%)
Strand=Plus/Minus
Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG--GACGAGTCCTCGAGCTGCTTG 133520
||| ||| ||||||| || ||||| || | ||| ||| || || |||||||||
Sbjct 7362086 GGTCGACACTTTCTGGATTTTGTAGTCAGAAAGAGTGTGGACA--TCTTCCAGCTGCTTG 7362029
Query 133521 CCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGC 133580
|| ||| | ||||||| ||||||||| || ||||| |||| || || |||| || |
Sbjct 7362028 CCTGCGAAGATGAGCCTCTGCTGGTCTGGGAGGATGTCTTCTTTATCCTGGATC-TTGGT 7361970
Query 133581 TTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGA 133640
|| | | |||| |||| || |||| || | ||||| ||| ||||| || |||
Sbjct 7361969 TTCACGTTTTCAATGCTGTCACTG---CCCACCTCCAGGGTGATGGTCTTGCCAGTGAGA 7361913
Query 133641 GTTTTTACGAAAATCTGCA 133659
|| || || || |||||||
Sbjct 7361912 GTCTTCACAAAGATCTGCA 7361894
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 483341494817760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |