Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colobus_20angolensis_20palliatus_20[refseq_20GCF_5F000951035.1_20201 5-03-12] 13,124 sequences; 2,970,124,662 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq5126 98.7 9e-16 seq6727 95.1 1e-14 >seq5126 Length=8658521 Score = 98.7 bits (108), Expect = 9e-16 Identities = 138/194 (71%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 ||||| || || ||||||||||| || |||||| |||||| ||||| || |||| | Sbjct 3005814 GACTCCTTCTGGATGTTGTAGTCAGACAGGGTACGACCATCTTCCAGCTGCTTTCCGGCA 3005755 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 |||| || | ||| || || ||||| |||||||| ||||| || ||| || | Sbjct 3005754 AAGATCAGCCTCTGCTGGTCGGGAGGAATGCCTTCCTTATCTTGGATCTTTGCCTTGACA 3005695 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 | || | || || | ||||| || |||| || | || || ||||||||||| || Sbjct 3005694 TTCTCAATGGTGTCACTGGGCTCAACCTCGAGGGTGATGGTCTTGCCAGTCAGAGTCTTC 3005635 Query 132110 ATGAAAATCTGCAT 132123 | ||| |||||||| Sbjct 3005634 ACGAAGATCTGCAT 3005621 Score = 84.2 bits (92), Expect = 2e-11 Identities = 135/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 |||||||| || ||||||||||| || || ||| |||||| ||||| || || | | Sbjct 3006042 GACTCTTTCTGGATGTTGTAGTCAGACAGCGTGCGCCCATCTTCCAGCTGCTTTCCAGCA 3005983 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 |||| | | ||| || || ||||| |||||||| || || || ||| || | Sbjct 3005982 AAGATCAACCTCTGCTGGTCAGGAGGGATGCCTTCCTTGTCTTGGATCTTTGCCTTGACA 3005923 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 | || | || ||| | ||||| || |||| || | || || |||||||| || || Sbjct 3005922 TTCTCGATGGTGTCGCTGGGCTCGACCTCGAGGGTAATGGTCTTGCCAGTCAGGGTCTTC 3005863 Query 132110 ATGAAAATCTGCAT 132123 | ||| |||||||| Sbjct 3005862 ACGAAGATCTGCAT 3005849 >seq6727 Length=1359887 Score = 95.1 bits (104), Expect = 1e-14 Identities = 81/100 (81%), Gaps = 0/100 (0%) Strand=Plus/Plus Query 147503 TGTACTGCACGATTTCGGCGCACAGGTTGCTGCATTTTATGACTCCCAAATTTTGCTGAT 147562 |||||| ||| ||||| | |||||| ||||||||||| ||| ||||| || ||||| | Sbjct 319395 TGTACTCCACTATTTCTGTGCACAGATTGCTGCATTTGATGGTTCCCAGGTTCTGCTGGT 319454 Query 147563 TGCTTTTCCGATTGCACGCGTCTTTGAAGAGCATGTACGG 147602 |||| |||||||| || | |||||| ||||||| ||||| Sbjct 319455 TGCTCTTCCGATTACAGGAATCTTTGTAGAGCATATACGG 319494 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476533011932640