Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colobus_20angolensis_20palliatus_20[refseq_20GCF_5F000951035.1_20201
5-03-12] 13,124 sequences; 2,970,124,662 total letters
Query= NC_025960.1
Length=148981
Score E
Sequences producing significant alignments: (Bits) Value
seq5126 98.7 9e-16
seq6727 95.1 1e-14
>seq5126
Length=8658521
Score = 98.7 bits (108), Expect = 9e-16
Identities = 138/194 (71%), Gaps = 0/194 (0%)
Strand=Plus/Minus
Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989
||||| || || ||||||||||| || |||||| |||||| ||||| || |||| |
Sbjct 3005814 GACTCCTTCTGGATGTTGTAGTCAGACAGGGTACGACCATCTTCCAGCTGCTTTCCGGCA 3005755
Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049
|||| || | ||| || || ||||| |||||||| ||||| || ||| || |
Sbjct 3005754 AAGATCAGCCTCTGCTGGTCGGGAGGAATGCCTTCCTTATCTTGGATCTTTGCCTTGACA 3005695
Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109
| || | || || | ||||| || |||| || | || || ||||||||||| ||
Sbjct 3005694 TTCTCAATGGTGTCACTGGGCTCAACCTCGAGGGTGATGGTCTTGCCAGTCAGAGTCTTC 3005635
Query 132110 ATGAAAATCTGCAT 132123
| ||| ||||||||
Sbjct 3005634 ACGAAGATCTGCAT 3005621
Score = 84.2 bits (92), Expect = 2e-11
Identities = 135/194 (70%), Gaps = 0/194 (0%)
Strand=Plus/Minus
Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989
|||||||| || ||||||||||| || || ||| |||||| ||||| || || | |
Sbjct 3006042 GACTCTTTCTGGATGTTGTAGTCAGACAGCGTGCGCCCATCTTCCAGCTGCTTTCCAGCA 3005983
Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049
|||| | | ||| || || ||||| |||||||| || || || ||| || |
Sbjct 3005982 AAGATCAACCTCTGCTGGTCAGGAGGGATGCCTTCCTTGTCTTGGATCTTTGCCTTGACA 3005923
Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109
| || | || ||| | ||||| || |||| || | || || |||||||| || ||
Sbjct 3005922 TTCTCGATGGTGTCGCTGGGCTCGACCTCGAGGGTAATGGTCTTGCCAGTCAGGGTCTTC 3005863
Query 132110 ATGAAAATCTGCAT 132123
| ||| ||||||||
Sbjct 3005862 ACGAAGATCTGCAT 3005849
>seq6727
Length=1359887
Score = 95.1 bits (104), Expect = 1e-14
Identities = 81/100 (81%), Gaps = 0/100 (0%)
Strand=Plus/Plus
Query 147503 TGTACTGCACGATTTCGGCGCACAGGTTGCTGCATTTTATGACTCCCAAATTTTGCTGAT 147562
|||||| ||| ||||| | |||||| ||||||||||| ||| ||||| || ||||| |
Sbjct 319395 TGTACTCCACTATTTCTGTGCACAGATTGCTGCATTTGATGGTTCCCAGGTTCTGCTGGT 319454
Query 147563 TGCTTTTCCGATTGCACGCGTCTTTGAAGAGCATGTACGG 147602
|||| |||||||| || | |||||| ||||||| |||||
Sbjct 319455 TGCTCTTCCGATTACAGGAATCTTTGTAGAGCATATACGG 319494
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 476533011932640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |