Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colobus_20angolensis_20palliatus_20[refseq_20GCF_5F000951035.1_20201
5-03-12] 13,124 sequences; 2,970,124,662 total letters
Query= NC_026922.1
Length=157977
Score E
Sequences producing significant alignments: (Bits) Value
seq5126 118 1e-21
seq12126 107 2e-18
seq6459 107 2e-18
seq4805 102 8e-17
seq2558 102 8e-17
seq6460 98.7 1e-15
seq1 91.5 1e-13
seq7038 89.7 5e-13
seq5149 89.7 5e-13
seq11570 84.2 2e-11
seq2336 82.4 8e-11
>seq5126
Length=8658521
Score = 118 bits (130), Expect = 1e-21
Identities = 163/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
|| |||||||| || | ||| ||||| || ||||| ||||| || |||||||||||
Sbjct 3005847 CCACCTCTGAGGCGGAGCACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAC 3005788
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| ||| || || || ||||| || || ||||| |||| | |||||| ||||| ||
Sbjct 3005787 AGGGTACGACCATCTTCCAGCTGCTTTCCGGCAAAGATCAGCCTCTGCTGGTCGGGAGGA 3005728
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666
|||||||| || ||||| || ||| ||||| || | ||||| | || ||
Sbjct 3005727 ATGCCTTCCTTATCTTGGATCTTTGCCTTGACATTCTCAATGGTGTCACTGGGCTCAACC 3005668
Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATT 134714
||||| || ||||| || || || | ||| || ||||| || ||||||
Sbjct 3005667 TCGAGGGTGATGGTCTTGCCAGTCAGAGTCTTCACGAAGATCTGCATT 3005620
Score = 111 bits (122), Expect = 2e-19
Identities = 163/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCC 134545
|| |||||||| || | ||| ||||| | ||||| || || || ||||||||||| | |
Sbjct 3006075 CCACCTCTGAGGCGGAGCACCAGGTGCAAGGTGGACTCTTTCTGGATGTTGTAGTCAGAC 3006016
Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605
| | ||| | || || ||||| || || ||||| ||||| | |||||| || || ||
Sbjct 3006015 AGC-GTGCGCCCATCTTCCAGCTGCTTTCCAGCAAAGATCAACCTCTGCTGGTCAGGAGG 3005957
Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665
|||||||| || ||||| || ||| ||||| || | |||||| | || ||
Sbjct 3005956 GATGCCTTCCTTGTCTTGGATCTTTGCCTTGACATTCTCGATGGTGTCGCTGGGCTCGAC 3005897
Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
||||| |||||||| || || || | || || ||||| || |||||
Sbjct 3005896 CTCGAGGGTAATGGTCTTGCCAGTCAGGGTCTTCACGAAGATCTGCAT 3005849
>seq12126
Length=7615049
Score = 107 bits (118), Expect = 2e-18
Identities = 159/223 (71%), Gaps = 2/223 (1%)
Strand=Plus/Minus
Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCCAACGGTGTG 134554
|||| |||||| || || || || || ||||||||||| |||||||| | ||| || |
Sbjct 7457965 AGTCTCAACACAAGATGAAGAGTAGACTCCTTTTGAATATTGTAGTCAGACAA-AGTACG 7457907
Query 134555 AGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTC 134614
|| || || || ||||| ||||| ||||| | |||||||| || || || |||||
Sbjct 7457906 TCCATCTTCCAGTTGCTTGCCAGCAAAGATCAATCTTTGCTGATCAGGAGGAATTCCTTC 7457847
Query 134615 TTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGT 134674
|| || || || || || || || | || || || | ||| || ||||| ||
Sbjct 7457846 CTTATCCTGGATCTTGGCCTTTACATTTTCTATCGTATCCGAGGGTTCAACCTCGAGGGT 7457787
Query 134675 AATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTTG 134717
||||| || || || | ||||| |||||||| |||||||||
Sbjct 7457786 GATGGTCTTCCCCGTAAGGGTTTTCACGAAAATCTGCATTTTG 7457744
>seq6459
Length=16685579
Score = 107 bits (118), Expect = 2e-18
Identities = 159/223 (71%), Gaps = 2/223 (1%)
Strand=Plus/Minus
Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCCAACGGTGTG 134554
|||| |||||| || || || || || ||||||||||| |||||||| | ||| || |
Sbjct 968950 AGTCTCAACACAAGATGAAGAGTAGACTCCTTTTGAATATTGTAGTCAGACAA-AGTACG 968892
Query 134555 AGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTC 134614
|| || || || ||||| ||||| ||||| | |||||||| || || || |||||
Sbjct 968891 TCCATCTTCCAGTTGCTTGCCAGCAAAGATCAATCTTTGCTGATCAGGAGGAATTCCTTC 968832
Query 134615 TTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGT 134674
|| || || || || || || || | || || || | ||| || ||||| ||
Sbjct 968831 CTTATCCTGGATCTTGGCCTTTACATTTTCTATCGTATCCGAGGGTTCAACCTCGAGGGT 968772
Query 134675 AATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTTG 134717
||||| || || || | ||||| |||||||| |||||||||
Sbjct 968771 GATGGTCTTCCCCGTAAGGGTTTTCACGAAAATCTGCATTTTG 968729
>seq4805
Length=5228064
Score = 102 bits (112), Expect = 8e-17
Identities = 158/223 (71%), Gaps = 2/223 (1%)
Strand=Plus/Minus
Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCCAACGGTGTG 134554
|||| |||||| || || || || || ||||||||||| |||||||| | ||| || |
Sbjct 4473630 AGTCTCAACACAAGATGAAGAGTAGACTCCTTTTGAATATTGTAGTCAGACAA-AGTACG 4473572
Query 134555 AGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTC 134614
|| || || || ||||| ||||| |||| | |||||||| || || || |||||
Sbjct 4473571 TCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGAATTCCTTC 4473512
Query 134615 TTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGT 134674
|| || || || || || || || | || || || | ||| || ||||| ||
Sbjct 4473511 CTTATCCTGGATCTTGGCCTTTACATTTTCTATCGTATCCGAGGGTTCAACCTCGAGGGT 4473452
Query 134675 AATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTTG 134717
||||| || || || | ||||| |||||||| |||||||||
Sbjct 4473451 GATGGTCTTCCCCGTAAGGGTTTTCACGAAAATCTGCATTTTG 4473409
>seq2558
Length=10987700
Score = 102 bits (112), Expect = 8e-17
Identities = 163/233 (70%), Gaps = 1/233 (0%)
Strand=Plus/Minus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
|| |||| || ||||||| ||||| | ||||| || || || |||||||||||
Sbjct 486483 CCACCTCGCAGGGGCAACACCAGGTGCGGGGTGGACTCTTTGTGGATGTTGTAGTCTGAG 486424
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| ||||| || || ||||||||||| ||||| |||| ||||||||| || || ||
Sbjct 486423 AGAGTGTGGCCATCTTCCAGCTGTTTGCCGGCAAATATCAGACGCTGCTGGTCAGGTGGG 486364
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666
|| || || || ||||||||||| |||||| || | ||||| | || ||
Sbjct 486363 ATACCCTCCTTGTCTTGAATTTTGGCTTTGACGTTCTCAATAGTGTCACTGGGCTCGACC 486304
Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT-TTTGT 134718
|| || || |||||||| || || | || || || || ||||| |||||
Sbjct 486303 TCAAGGGTGATGGTTTTGCCCGTGAGGGTCTTTGTAAAGATCTGCATGTTTGT 486251
>seq6460
Length=10151297
Score = 98.7 bits (108), Expect = 1e-15
Identities = 152/217 (70%), Gaps = 0/217 (0%)
Strand=Plus/Plus
Query 134500 GCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGT 134559
||||||| ||||| || ||||| || || || ||||||||||| | ||| | |
Sbjct 3934078 GCAACACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCTGAGAGAGTGCGGCCAT 3934137
Query 134560 CGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTT 134619
| || ||||||||||| ||||| |||| | ||||||| || || || || || || || |
Sbjct 3934138 CTTCCAGCTGTTTGCCGGCAAATATCAGATGCTGCTGGTCAGGTGGGATACCCTCCTTGT 3934197
Query 134620 CTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGG 134679
||||||||| | |||| | || | ||||| | || || || || || ||||
Sbjct 3934198 GTTGAATTTTGTCTTTGTCATTCTCAATGGTGTCACTGGGCTCGACCTCAAGGGTGATGG 3934257
Query 134680 TTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTT 134716
|||| || || | || || || || || ||||| ||
Sbjct 3934258 TTTTGCCCGTGAGGGTCTTCACAAAGATCTGCATGTT 3934294
>seq1
Length=19716903
Score = 91.5 bits (100), Expect = 1e-13
Identities = 155/222 (70%), Gaps = 2/222 (1%)
Strand=Plus/Plus
Query 134497 GTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCCAACGGTGTGA 134555
||| |||||| || || || || || ||||||||||| |||||||| | ||| ||
Sbjct 12236688 GTCTCAACACAAGATGAAGAGTAGACTCCTTTTGAATATTGTAGTCAGACAA-AGTACAT 12236746
Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615
|| || || || ||||| ||||| ||||| | |||||||| || || || |||||
Sbjct 12236747 CCATCTTCCAGTTGCTTGCCAGCAAAGATCAATCTTTGCTGATCAGGAGGAATTCCTTCC 12236806
Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675
| || || || || || || || || || || | ||| || ||||| ||
Sbjct 12236807 TCATCCTGGATCTTGGCCTTTACATTTTCTGTCGTATCCGAGGGTTCAACCTCGAGGGTG 12236866
Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTTG 134717
||||| || || || | ||||| |||||||| |||||||||
Sbjct 12236867 ATGGTCTTCCCCGTAAGGGTTTTCACGAAAATCTGCATTTTG 12236908
>seq7038
Length=1003649
Score = 89.7 bits (98), Expect = 5e-13
Identities = 144/207 (70%), Gaps = 0/207 (0%)
Strand=Plus/Plus
Query 134511 TGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGT 134570
|| || || || ||||| || ||||||||||| || ||| | || || |||||
Sbjct 394442 TGCAGGGTCGACTCCTTCTGGATGTTGTAGTCAGAAAGAGTGCGGCCATCTTCCAGCTGC 394501
Query 134571 TTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTT 134630
||||||||||| || | | |||||| ||||| || |||||||| || || || |||||
Sbjct 394502 TTGCCTGCAAAGATGAGCCTCTGCTGGTCGGGGGGAATGCCTTCCTTATCCTGGATTTTG 394561
Query 134631 TGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTT 134690
|| || || | ||||| | ||||| || || || ||||| || |||||
Sbjct 394562 GCCTTCACATTTTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCGGTC 394621
Query 134691 AAAGTTTTAACGAAAATTTGCATTTTG 134717
| || || ||||| || |||||| ||
Sbjct 394622 AGGGTCTTCACGAAGATCTGCATTCTG 394648
>seq5149
Length=2416856
Score = 89.7 bits (98), Expect = 5e-13
Identities = 155/223 (70%), Gaps = 2/223 (1%)
Strand=Plus/Plus
Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCCAACGGTGTG 134554
|||| |||||| || || || || || ||||||||||| |||||||| | ||| || |
Sbjct 1496124 AGTCTCAACACAAGATGAAGAGTAGACTCCTTTTGAATATTGTAGTCAGACAA-AGTACG 1496182
Query 134555 AGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTC 134614
|| || || || ||||| ||||| |||| | |||||||| || || || |||||
Sbjct 1496183 TCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGAATTCCTTC 1496242
Query 134615 TTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGT 134674
|| || || || || || || || | || || | ||| || | ||| ||
Sbjct 1496243 CTTATCCTGGATCTTGGCCTTTACATTTTCTGTCATATCCGAGGGTTCAACCTGGAGGGT 1496302
Query 134675 AATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTTG 134717
||||| || || || | ||||| |||||||| |||||||||
Sbjct 1496303 GATGGTCTTCCCCGTAAGGGTTTTCACGAAAATCTGCATTTTG 1496345
>seq11570
Length=13276302
Score = 84.2 bits (92), Expect = 2e-11
Identities = 154/223 (69%), Gaps = 2/223 (1%)
Strand=Plus/Plus
Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCCAACGGTGTG 134554
|||| |||||| || || || || || ||||||||||| |||||||| | ||| || |
Sbjct 11748931 AGTCTCAACACAAGATGAAGAGTAGACTCCTTTTGAATATTGTAGTCAGACAA-AGTACG 11748989
Query 134555 AGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTC 134614
|| || || || ||||| ||||| |||| | |||||||| || || || |||||
Sbjct 11748990 TCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGAATTCCTTC 11749049
Query 134615 TTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGT 134674
|| || || || || || || || | || || || | ||| | || || ||
Sbjct 11749050 CTTCTCCTGGATCTTGGCCTTTACATTTTCTATCGTATCCGAGGGTTCAGCCTCAAGGGT 11749109
Query 134675 AATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTTG 134717
||||| | || || | ||||| | |||||| |||||||||
Sbjct 11749110 GATGGTCTGCCCCGTAAGGGTTTTCATGAAAATCTGCATTTTG 11749152
>seq2336
Length=9258750
Score = 82.4 bits (90), Expect = 8e-11
Identities = 57/65 (88%), Gaps = 0/65 (0%)
Strand=Plus/Minus
Query 21436 ACCCGTCTTTCAAAGAAATTTGTTTTTCCTTCTAGTGCAATGTTTTTCATAAAATTAAAA 21495
|| ||| | ||||||||||||||||||||||||| | |||||||| |||||||| ||||
Sbjct 5801336 ACTCGTTTCTCAAAGAAATTTGTTTTTCCTTCTAAAGAAATGTTTTCCATAAAATCAAAA 5801277
Query 21496 GGATT 21500
|||||
Sbjct 5801276 GGATT 5801272
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 505315489392480
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