Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colobus_20angolensis_20palliatus_20[refseq_20GCF_5F000951035.1_20201 5-03-12] 13,124 sequences; 2,970,124,662 total letters Query= NC_027016.1 Length=226084 Score E Sequences producing significant alignments: (Bits) Value seq3483 87.8 3e-12 >seq3483 Length=10873343 Score = 87.8 bits (96), Expect = 3e-12 Identities = 197/296 (67%), Gaps = 0/296 (0%) Strand=Plus/Minus Query 214605 AAGGAGATAGCTGTCGAGCTGGAGGCCTTCTACGGTGATATCGAAGCCGTCGAACTCTAC 214664 ||||| || ||| ||| |||| || |||| ||||| ||||| || || || || || Sbjct 3199136 AAGGAAATGTCTGCAGAGTTGGAAGCACTCTATGGTGACATCGATGCTGTGGAGCTGTAT 3199077 Query 214665 GCTGATTTCCTCGCTGAAAAACCGTGTCCCGATGCCATCCTCGGTGACGGCGTCCTCGAG 214724 ||| | || | ||||| || |||| ||||||||| | ||||| | | | || Sbjct 3199076 CCTGCCCTTCTGGTAGAAAAGCCTCGTCCAGATGCCATCTTTGGTGAGACCATGGTAGAA 3199017 Query 214725 TCGGGGGCTCCGTTCTCCCTGAGGGGACTCGCGGCGAACGTCATCTGCTCCCCGGGCTAC 214784 || || ||||||||| ||| ||||| || || || || || || || | |||| Sbjct 3199016 GTTGGAGCACCGTTCTCCTTGAAAGGACTTATGGGTAATGTTATATGTTCTCCTGCCTAC 3198957 Query 214785 TGGAAACGCAACACACTCGGTAGCTCCGCGAGTTTCAACATCGTGAGGAGCGCGACCCTT 214844 ||||| | | ||| | ||| | | | |||| | ||| | | | || | || Sbjct 3198956 TGGAAGCCAAGCACTTTTGGTGGAGAAGTGGGTTTTCAAATCATCAACACTGCCTCAATT 3198897 Query 214845 CAGTCTCTCATCTGTAGCAACGTCAAGGGATGTCCGTTAGCCGCATTCCGAGCTCC 214900 |||||||||||||| | ||||| ||||| ||||| || | ||||| | | ||| Sbjct 3198896 CAGTCTCTCATCTGCAATAACGTGAAGGGCTGTCCCTTTACTTCATTCAGTGTTCC 3198841 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 723222135941760